Miyakogusa Predicted Gene
- Lj4g3v2604790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2604790.1 Non Chatacterized Hit- tr|D7LHH5|D7LHH5_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,30.8,0.0000000000001,LEURICHRPT,NULL; LRR,Leucine-rich repeat;
no description,NULL; Leucine-rich repeats, typical (most
p,NODE_12084_length_1554_cov_11.497426.path2.1
(1557 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS344436 similar to UniRef100_A7QDI6 Cluster: Chromosom... 1269 0.0
gnl|LJGI|AV428671 similar to UniRef100_A7QDI6 Cluster: Chromosom... 66 7e-10
gnl|LJGI|TC66972 weakly similar to UniRef100_A7QDI6 Cluster: Chr... 62 1e-08
>gnl|LJGI|FS344436 similar to UniRef100_A7QDI6 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 648
Score = 1269 bits (640), Expect = 0.0
Identities = 643/644 (99%)
Strand = Plus / Plus
Query: 1 atgaaacccttttgcatattcttgattcttctaacactgttttctctcacagaatcatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 atgaaacccttttgcatattcttgattcttctaacactgttttctctcacagaatcatct 64
Query: 61 tgcaacagtgcaggagaccaggccctggtgtcaaaggctttcaaatctgtctccggcttc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cgcaacagtgcaggagaccaggccctggtgtcaaaggctttcaaatctgtctccggcttc 124
Query: 121 aacatctccaccttgttccaaaccagagcttcaaactgttcacactctcacatcaccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aacatctccaccttgttccaaaccagagcttcaaactgttcacactctcacatcaccaaa 184
Query: 181 atagtacttccatccaagaatctaaccggaacaatctcatggagctatctgagaaacatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 atagtacttccatccaagaatctaaccggaacaatctcatggagctatctgagaaacatg 244
Query: 241 tccaatttgcaggtccttgatctctctggaaattcactagaaggccacatcccaagctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tccaatttgcaggtccttgatctctctggaaattcactagaaggccacatcccaagctgg 304
Query: 301 ttttggtcaactttatccttgttcgaagtaaacctctcaaggaacaagtttggaggcagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttttggtcaactttatccttgttcgaagtaaacctctcaaggaacaagtttggaggcagc 364
Query: 361 atcatctctaacctgaaaccaaaatcttcatcacaggttcaaatgctcaacctctcacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atcatctctaacctgaaaccaaaatcttcatcacaggttcaaatgctcaacctctcacac 424
Query: 421 aacagattcaccaactgggttttcctctctggcttcacaaacgtcaaaaccctcgacctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aacagattcaccaactgggttttcctctctggcttcacaaacgtcaaaaccctcgacctc 484
Query: 481 tctcacaacaacctacgaacactcccctacggattccaaaacctcaccaagcttcaacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tctcacaacaacctacgaacactcccctacggattccaaaacctcaccaagcttcaacac 544
Query: 541 cttaacctctcaagctgcaatctccaagacaacatcaaatccatctcttccctgcattca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cttaacctctcaagctgcaatctccaagacaacatcaaatccatctcttccctgcattca 604
Query: 601 cttcactccttggacttatcaaacaacaccttaaccggttcctt 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cttcactccttggacttatcaaacaacaccttaaccggttcctt 648
>gnl|LJGI|AV428671 similar to UniRef100_A7QDI6 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 236
Score = 65.9 bits (33), Expect = 7e-10
Identities = 89/108 (82%)
Strand = Plus / Plus
Query: 1010 agaaatcagggccattcgcgtttgaaacagagtcagggtcaacgtgggtggctgagatca 1069
|||| |||||||| ||||||||||| || ||||||||| | |||||||||| || | |
Sbjct: 116 agaagtcagggccgttcgcgtttgagacggagtcagggacgtcgtgggtggcggacttga 175
Query: 1070 aagaaccgtcgtctgcaccggtggtgatgtttgagaagccgttgatga 1117
| |||||||| | || |||||||| ||||||| |||||||||||||
Sbjct: 176 aggaaccgtcngcggcggcggtggtggtgtttgaaaagccgttgatga 223
>gnl|LJGI|TC66972 weakly similar to UniRef100_A7QDI6 Cluster: Chromosome chr10
scaffold_81, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_81, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 759
Score = 61.9 bits (31), Expect = 1e-08
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 466 aaaaccctcgacctctctcacaacaacctacgaacactcccctacggattccaaaacctc 525
|||| |||||||||||| |||||||||||| |||| | || | || |||||||| |||
Sbjct: 516 aaaagcctcgacctctcacacaacaacctaggaaccttaccttctgggttccaaaatctc 575
Query: 526 accaagcttcaacaccttaacctctcaagctgcaa 560
||||| || || |||||| | ||||||||||||||
Sbjct: 576 accaaactacaccaccttgatctctcaagctgcaa 610