Miyakogusa Predicted Gene

Lj4g3v2604770.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2604770.2 Non Chatacterized Hit- tr|I1KSE9|I1KSE9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,66.49,0,seg,NULL;
myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF ,Myb domain, plants;
Homeodomain-like,Ho,CUFF.51313.2
         (1230 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59276                                                      515   e-145
gnl|LJGI|TC80735 similar to UniRef100_A7PZ25 Cluster: Chromosome...    56   5e-07
gnl|LJGI|TC59772 similar to UniRef100_A7P441 Cluster: Chromosome...    54   2e-06

>gnl|LJGI|TC59276 
          Length = 855

 Score =  515 bits (260), Expect = e-145
 Identities = 266/268 (99%)
 Strand = Plus / Plus

                                                                        
Query: 963  agctgagttgagcattggaaccaacacaagaatcaaggaatttctatcaaaccctgatga 1022
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    agctgagttgagcattggagccaacacaagaatcaaggaatttctatcaaaccctgatga 61

                                                                        
Query: 1023 gcaccacaacccttccaacagtttaaagctagaatttaatcccccattccggattaagtt 1082
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   gcaccacaacccttccaacagtttaaagctagaatttaatcccccattccggattaagtt 121

                                                                        
Query: 1083 gaatcaagaaaagttacagatagacaagcaatgtgtgcctgatttgcaactgagtttaag 1142
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 122  gaatcaagaaaagttacagatagacaagcgatgtgtgcctgatttgcaactgagtttaag 181

                                                                        
Query: 1143 tcagaaaaatagcaacaacgatggtggcgagaccgatcattccagagaaacgcaagaaat 1202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  tcagaaaaatagcaacaacgatggtggcgagaccgatcattccagagaaacgcaagaaat 241

                                        
Query: 1203 caacacaaaactttcactttcttagaat 1230
            ||||||||||||||||||||||||||||
Sbjct: 242  caacacaaaactttcactttcttagaat 269


>gnl|LJGI|TC80735 similar to UniRef100_A7PZ25 Cluster: Chromosome chr4 scaffold_39,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_39, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 854

 Score = 56.0 bits (28), Expect = 5e-07
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 410 ttgctcatgtcaagagtcacttgcagatgtat 441
           |||||||||||||||| |||||||||||||||
Sbjct: 177 ttgctcatgtcaagagccacttgcagatgtat 208


>gnl|LJGI|TC59772 similar to UniRef100_A7P441 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (37%)
          Length = 822

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                       
Query: 243 tggaagaagaggtggtgtgagacaatatgttagatcaaagatgcctcgccttcgatggac 302
           |||||||  ||||| |||||| || ||| | || |||||| | ||||| ||  |||||||
Sbjct: 202 tggaagagaaggtgctgtgaggcagtatataaggtcaaaggttcctcgtctaagatggac 261

                                                              
Query: 303 tcctgatcttcatctttcctttgtgcatgctgttgaaaggcttggtggtca 353
           |||||| ||||| | || |||||| |||||  ||||||| |||||||||||
Sbjct: 262 tcctgaacttcaccgttgctttgttcatgccattgaaagccttggtggtca 312