Miyakogusa Predicted Gene

Lj4g3v2604650.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2604650.1 Non Chatacterized Hit- tr|C6SXW0|C6SXW0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25610
PE,86.81,0,DUF640,Domain of unknown function DUF640; seg,NULL; FAMILY
NOT NAMED,NULL,CUFF.51301.1
         (530 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61313                                                       74   1e-12
gnl|LJGI|BW595790                                                      58   6e-08

>gnl|LJGI|TC61313 
          Length = 777

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                       
Query: 154 tggaacacctttgggcaatacttgaagaataggactccccaagttccactctctcagtgc 213
           |||||||| |||||||| |||||||| ||   ||  |||| ||||||||| |||||||||
Sbjct: 159 tggaacacttttgggcagtacttgaataaccagagacccccagttccactttctcagtgc 218

                                                                
Query: 214 aacttcaaccatgttcttgatttccttcgctaccttgaccaatttgggaagac 266
           || |||||||||||  | || || ||| | ||||| |||||||||||||||||
Sbjct: 219 aatttcaaccatgtcatggaatttcttaggtacctagaccaatttgggaagac 271


>gnl|LJGI|BW595790 
          Length = 478

 Score = 58.0 bits (29), Expect = 6e-08
 Identities = 80/97 (82%)
 Strand = Plus / Plus

                                                                       
Query: 199 ccactctctcagtgcaacttcaaccatgttcttgatttccttcgctaccttgaccaattt 258
           ||||||||  ||||||||| |||||| ||  | |||||||| || ||||||||||| || 
Sbjct: 199 ccactctccgagtgcaactgcaaccacgtcttggatttcctccgttaccttgaccagttc 258

                                                
Query: 259 gggaagactaaggtccactcgcacggttgcatcttct 295
           |||||||| ||||| |||  ||| |||||||| ||||
Sbjct: 259 gggaagaccaaggttcacctgcaaggttgcatgttct 295