Miyakogusa Predicted Gene

Lj4g3v2604510.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2604510.1 Non Chatacterized Hit- tr|I6YHV0|I6YHV0_LINUS
Putative copper ion-binding protein OS=Linum
usitatiss,39.44,2e-19,HMA_2,Heavy metal-associated domain, HMA; GB
DEF: F28N24.19 PROTEIN,NULL; COPPER TRANSPORT PROTEIN A,CUFF.51287.1
         (396 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76663 similar to UniRef100_A7QDL0 Cluster: Chromosome...   759   0.0  

>gnl|LJGI|TC76663 similar to UniRef100_A7QDL0 Cluster: Chromosome chr10 scaffold_81,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_81, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (48%)
          Length = 808

 Score =  759 bits (383), Expect = 0.0
 Identities = 386/387 (99%)
 Strand = Plus / Plus

                                                                       
Query: 6   gatagtagagatgtgtgtgcacatggattgtgcaggttgcgaaaacaagataaggaaggc 65
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 422 gatagtagagatgtgtgtgcacatggattgtacaggttgcgaaaacaagataaggaaggc 481

                                                                       
Query: 66  tcttacaaaattacgtggagttgatagtgttgagatagacatggggatgcaaaaagtgac 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcttacaaaattacgtggagttgatagtgttgagatagacatggggatgcaaaaagtgac 541

                                                                       
Query: 126 tgtgatgggttgggctgagcaaaagaaggttctaagaacagtaaggaaaactggcaggag 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgtgatgggttgggctgagcaaaagaaggttctaagaacagtaaggaaaactggcaggag 601

                                                                       
Query: 186 agcagagctgtggccatatccttacgagccagaataccatgccttcacacgcaattactc 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 agcagagctgtggccatatccttacgagccagaataccatgccttcacacgcaattactc 661

                                                                       
Query: 246 ctacaagccttcctcttctcacaagcatggatacagcaatggtgaagattttgggtatta 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ctacaagccttcctcttctcacaagcatggatacagcaatggtgaagattttgggtatta 721

                                                                       
Query: 306 caggaagccaattggtgctacattgatcaaagagaaagccatggccatgttcagcgatga 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 caggaagccaattggtgctacattgatcaaagagaaagccatggccatgttcagcgatga 781

                                      
Query: 366 caaccctcatgcttgttttataatgtg 392
           |||||||||||||||||||||||||||
Sbjct: 782 caaccctcatgcttgttttataatgtg 808