Miyakogusa Predicted Gene
- Lj4g3v2604250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2604250.1 Non Chatacterized Hit- tr|C6TJQ3|C6TJQ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40581 PE,88.48,0,pth:
peptidyl-tRNA hydrolase,Peptidyl-tRNA hydrolase;
Pept_tRNA_hydro_bact,Peptidyl-tRNA hydrolase; ,CUFF.51265.1
(654 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63646 similar to UniRef100_A7P074 Cluster: Chromosome... 751 0.0
gnl|LJGI|BP057498 similar to UniRef100_A7P074 Cluster: Chromosom... 416 e-116
gnl|LJGI|TC65480 similar to UniRef100_A7P074 Cluster: Chromosome... 280 1e-74
gnl|LJGI|TC63327 homologue to UniRef100_A7P074 Cluster: Chromoso... 153 2e-36
>gnl|LJGI|TC63646 similar to UniRef100_A7P074 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 695
Score = 751 bits (379), Expect = 0.0
Identities = 385/387 (99%)
Strand = Plus / Plus
Query: 1 atgctcaatcggctaagcaagcggtgcttctccaccctcgctccacgcccatggcttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 atgctcaatcggctaagcaagcggtgcttctccaccctcgctccacgcccatggcttttc 139
Query: 61 gtagggttaggcaaccctggcgacaagtacaaaggaaccagacacaatgtcggatttgag 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gtagggttgggcaaccctggcgacaagtacaaaggaaccagacacaatgtcggatttgag 199
Query: 121 atgattgatgcgtttgctgagtcacaggggattcagatgaatgaacttcattccaaagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atgattgatgcgtttgctgagtcacaggggattcagatgaatgaacttcattccaaagcc 259
Query: 181 atttttggaaaaggttttgttggtgaagttcctgttttccttgcaaagcctcaaacttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atttttggaaaaggttttgttggtgaagttcctgttttccttgcaaagcctcaaacttac 319
Query: 241 atgaatctcagcggtgaatcgacaggaccactggctgcttattacaagtttcctcttaat 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 320 atgaatctcagcggtgaatcgacaggaccactggctgcttattacaagttgcctcttaat 379
Query: 301 caagtgcttgtgttccatgatgacttgaacttgccttgtggggtgcttcgtctttatgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caagtgcttgtgttccatgatgacttgaacttgccttgtggggtgcttcgtctttatgac 439
Query: 361 aaaggaggtcatgggtgccacaaaggg 387
|||||||||||||||||||||||||||
Sbjct: 440 aaaggaggtcatgggtgccacaaaggg 466
>gnl|LJGI|BP057498 similar to UniRef100_A7P074 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 570
Score = 416 bits (210), Expect = e-116
Identities = 210/210 (100%)
Strand = Plus / Minus
Query: 445 gggattgggaagcctcctgggcaaatggatcctaaagcatttttgcttcaaaagttcaat 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gggattgggaagcctcctgggcaaatggatcctaaagcatttttgcttcaaaagttcaat 321
Query: 505 gtaacagctagacaaagaattgatgaggctttgcaagagggtgttgatgcattgaagatc 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtaacagctagacaaagaattgatgaggctttgcaagagggtgttgatgcattgaagatc 261
Query: 565 cttctatctagaggtttggaagtaagtgcaaaaaggtttaacaaagagcagaagtataag 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cttctatctagaggtttggaagtaagtgcaaaaaggtttaacaaagagcagaagtataag 201
Query: 625 cacttaagagtgcagactttaccagtttga 654
||||||||||||||||||||||||||||||
Sbjct: 200 cacttaagagtgcagactttaccagtttga 171
Score = 121 bits (61), Expect = 6e-27
Identities = 61/61 (100%)
Strand = Plus / Minus
Query: 386 ggctgaagagtgtgatctatcacttcagaggaaatagagaatttcctcggctaagaattg 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ggctgaagagtgtgatctatcacttcagaggaaatagagaatttcctcggctaagaattg 466
Query: 446 g 446
|
Sbjct: 465 g 465
>gnl|LJGI|TC65480 similar to UniRef100_A7P074 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 1580
Score = 280 bits (141), Expect = 1e-74
Identities = 168/177 (94%)
Strand = Plus / Plus
Query: 396 tgtgatctatcacttcagaggaaatagagaatttcctcggctaagaattgggattgggaa 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgatctatcacttcagaggaaatagagaatttcctcggctaagaattgggattgggaa 560
Query: 456 gcctcctgggcaaatggatcctaaagcatttttgcttcaaaagttcaatgtaacagctag 515
|||||||||||||||||||||||||||||||| |||||||| ||| |||| | |||||||
Sbjct: 561 gcctcctgggcaaatggatcctaaagcattttagcttcaaatgtttaatgcaccagctag 620
Query: 516 acaaagaattgatgaggctttgcaagagggtgttgatgcattgaagatccttctatc 572
|||| |||||||||| |||||||||||||||||| |||| |||||||||||||||||
Sbjct: 621 acaatgaattgatgaagctttgcaagagggtgttaatgccttgaagatccttctatc 677
>gnl|LJGI|TC63327 homologue to UniRef100_A7P074 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 840
Score = 153 bits (77), Expect = 2e-36
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 386 ggctgaagagtgtgatctatcacttcagaggaaatagagaatttcctcggctaagaattg 445
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 760 ggctgaagagtgtgatctatcacttcagaggaaatagagaatttcctcgggtaagaattg 819
Query: 446 ggattgggaagcctcctgggc 466
|||||||||||||||||||||
Sbjct: 820 ggattgggaagcctcctgggc 840