Miyakogusa Predicted Gene

Lj4g3v2604100.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2604100.1 Non Chatacterized Hit- tr|G7LIM9|G7LIM9_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,50.89,0,DUF1644,Protein of unknown function DUF1644;
seg,NULL; FAMILY NOT NAMED,NULL; no description,Zinc fi,CUFF.51247.1
         (1495 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81775 similar to UniRef100_A7PEZ7 Cluster: Chromosome...   111   1e-23
gnl|LJGI|TC61548 similar to UniRef100_A7PEZ7 Cluster: Chromosome...    92   1e-17

>gnl|LJGI|TC81775 similar to UniRef100_A7PEZ7 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 507

 Score =  111 bits (56), Expect = 1e-23
 Identities = 131/156 (83%)
 Strand = Plus / Plus

                                                                       
Query: 127 aaagaatgggaggacgctaggtgttctatttgcatggaacaccctcacaatgcagttatt 186
           ||||||||||| || ||||||||| |  | |||||||| |||||||||||||||||| ||
Sbjct: 334 aaagaatgggaagatgctaggtgtccagtctgcatggagcaccctcacaatgcagttctt 393

                                                                       
Query: 187 ctgaaatgttcttcccatgagagaggttgccgaccctacatgtgcaataccagttaccgg 246
           || | |||||| || |||||||  || ||||| || ||||||||||| || ||||| || 
Sbjct: 394 ctcatatgttcatcacatgagaagggatgccgcccttacatgtgcaacactagttatcgc 453

                                               
Query: 247 cactccaactgccttgaccagttctgtaagtcattt 282
           ||||| ||||| ||||| |||||||| |||||||||
Sbjct: 454 cactcaaactgtcttgatcagttctgcaagtcattt 489


>gnl|LJGI|TC61548 similar to UniRef100_A7PEZ7 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (50%)
          Length = 1318

 Score = 91.7 bits (46), Expect = 1e-17
 Identities = 106/126 (84%)
 Strand = Plus / Plus

                                                                       
Query: 157 tgcatggaacaccctcacaatgcagttattctgaaatgttcttcccatgagagaggttgc 216
           |||||||| |||||||||||||||||| | || | |||||| || |||||||  || |||
Sbjct: 25  tgcatggagcaccctcacaatgcagttctcctcatatgttcatcacatgagaagggatgc 84

                                                                       
Query: 217 cgaccctacatgtgcaataccagttaccggcactccaactgccttgaccagttctgtaag 276
           || || ||||||||||| || ||||| || ||||| ||||| ||||| |||||||| |||
Sbjct: 85  cgcccttacatgtgcaacactagttatcgccactcaaactgtcttgatcagttctgcaag 144

                 
Query: 277 tcattt 282
           ||||||
Sbjct: 145 tcattt 150