Miyakogusa Predicted Gene
- Lj4g3v2603990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2603990.1 tr|Q0DMJ5|Q0DMJ5_ORYSJ Os03g0805500 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os03g08055,65.62,3e-17,seg,NULL,TC67535.path2.1
(609 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67535 weakly similar to UniRef100_A7P054 Cluster: Chr... 1100 0.0
gnl|LJGI|TC71803 similar to UniRef100_A7P054 Cluster: Chromosome... 494 e-139
>gnl|LJGI|TC67535 weakly similar to UniRef100_A7P054 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 776
Score = 1100 bits (555), Expect = 0.0
Identities = 591/609 (97%)
Strand = Plus / Plus
Query: 1 atggctaagaagagcataagggagctgggagtgaaggattttgtgaatgctggattatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 atggctaagaagagcataagggagctgggagtgaaggattttgtgaatgctggattatca 227
Query: 61 gtagcagaagccaatcaacttgatcttgttttgaaggatgtcctctccctcaccatcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gtagcagaagccaatcaacttgatcttgttttgaaggatgtcctctccctcaccatcacc 287
Query: 121 aacaacccagctgaaatctggcgccaccttatcacccggagagctctcaagccatcttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 aacaacccagctgaaatctggcgccaccttatcacccggagagctctcaagccatcttat 347
Query: 181 cctcaccccttgcatcagcttctatactactctctctatgatcatcacnnnnnnnnnnnn 240
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 cctcaccccttgcatcagcttctatactactctctctatgatcatcactcttcttcttct 407
Query: 241 nnnnnngataacactgcttctccccctccttattggttcccttctcttgagcagtccagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tcttctgataacactgcttctccccctccttattggttcccttctcttgagcagtccagg 467
Query: 301 agtaccaacctgggtcgtctaatggaaactcatgcttctaagctcttaggaccttcctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 agtaccaacctgggtcgtctaatggaaactcatgcttctaagctcttaggaccttcctac 527
Query: 361 aaagaccccatttctagttttcatctttttcaaaagttctctgttcaacaccctcaggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 aaagaccccatttctagttttcatctttttcaaaagttctctgttcaacaccctcaggtg 587
Query: 421 tactggtccctcgttctcaaggagctttcactttcatttgttgaacctccaaagtgcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tactggtccctcgttctcaaggagctttcactttcatttgttgaacctccaaagtgcatt 647
Query: 481 ttagatacctctgacccttcaaaacatggagggacttggtttcccggttctgtcctgaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ttagatacctctgacccttcaaaacatggagggacttggtttcccggttctgtcctgaat 707
Query: 541 attgcagaatgctgtttgcaaccaagtgggcacccaaacaaacaggatgacagtgtagcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 attgcagaatgctgtttgcaaccaagtgggcacccaaacaaacaggatgacagtgtagcc 767
Query: 601 attgtttgg 609
|||||||||
Sbjct: 768 attgtttgg 776
>gnl|LJGI|TC71803 similar to UniRef100_A7P054 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 654
Score = 494 bits (249), Expect = e-139
Identities = 321/345 (93%)
Strand = Plus / Plus
Query: 265 cctccttattggttcccttctcttgagcagtccaggagtaccaacctgggtcgtctaatg 324
|||| ||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 115 cctctttattggtttccttctcttgaccagtccagaagtactaacctgggtcgtctaatg 174
Query: 325 gaaactcatgcttctaagctcttaggaccttcctacaaagaccccatttctagttttcat 384
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 175 gaaactcatgcttctaagctattaggaccttcctacaaagaccccatttccagttttcat 234
Query: 385 ctttttcaaaagttctctgttcaacaccctcaggtgtactggtccctcgttctcaaggag 444
|||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 235 ctttttcagaagttctctgttcaacaccctcaggtgtactggtctctgattctcaaggag 294
Query: 445 ctttcactttcatttgttgaacctccaaagtgcattttagatacctctgacccttcaaaa 504
|||||||||||||||||||||||||| | ||||||||||||||| |||||||||| ||||
Sbjct: 295 ctttcactttcatttgttgaacctccgaggtgcattttagatacttctgaccctttaaaa 354
Query: 505 catggagggacttggtttcccggttctgtcctgaatattgcagaatgctgtttgcaacca 564
||||| || |||||| ||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 355 catgggggaacttggcttcccggttctgttttgaatattgcagattgctgtttgcaacca 414
Query: 565 agtgggcacccaaacaaacaggatgacagtgtagccattgtttgg 609
|||| |||||| |||||||| ||||||||||||||||||||||||
Sbjct: 415 agtgagcaccctaacaaacaagatgacagtgtagccattgtttgg 459