Miyakogusa Predicted Gene
- Lj4g3v2603940.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2603940.1 tr|G7LHY8|G7LHY8_MEDTR Neutral amino acid
transport protein OS=Medicago truncatula GN=MTR_8g085630
P,80.81,0,seg,NULL; GLUTAMATE/GAMMA-AMINOBUTYRATE ANTI-PORTER,NULL;
AMINO ACID TRANSPORTER,Amino acid/polyamin,CUFF.51226.1
(1429 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO005962 similar to UniRef100_A7P051 Cluster: Chromosom... 1235 0.0
gnl|LJGI|GO017331 weakly similar to UniRef100_A7P051 Cluster: Ch... 1227 0.0
gnl|LJGI|AU251380 similar to UniRef100_A7P051 Cluster: Chromosom... 444 e-124
>gnl|LJGI|GO005962 similar to UniRef100_A7P051 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 658
Score = 1235 bits (623), Expect = 0.0
Identities = 633/635 (99%), Gaps = 1/635 (0%)
Strand = Plus / Plus
Query: 1 atggaagacacactttactctccaaccccaatttcccagcaacatcttctttctgaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 atggaagacacactttactctccaaccccaatttcccagcaacatcttctttctgaccac 84
Query: 61 acagatgatccagctccaatccccaatcccaaaccacacaagaagctagctcttctccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 acagatgatccagctccaatccccaatcccaaaccacacaagaagctagctcttctccca 144
Query: 121 ctcatcttcctcatctactttgaagtttcaggtggcccttatggtgaggaatctgcagtt 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 145 ctcatcttcctcatctactttgaagtttcaggtggcccttatggtgaagaatctgcagtt 204
Query: 181 ggtgctgcagggcctctctttgccatccttggctttgtgatcttccctttcatctggagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggtgctgcagggcctctctttgccatccttggctttgtgatcttccctttcatctggagc 264
Query: 241 atcccagaggctcttctcacagcagagctagccacaaccttccctggcaatggtggattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atcccagaggctcttctcacagcagagctagccacaaccttccctggcaatggtggattt 324
Query: 301 gtcatatgggctaatgaagcctttggacccttttggggctccctcatgggcttctggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtcatatgggctaatgaagcctttggacccttttggggctccctcatgggcttctggaaa 384
Query: 361 ttcttcagtggggtgataaaccttgcctcatacccagttctctgcatagattatctcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcttcagtggggtgataaaccttgcctcatacccagttctctgcatagattatctcaag 444
Query: 421 cttgtaattccagctttatcctcaggtttacctcactatgtagccatattcctctccact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttgtaattccagctttatcctcaggtttacctcactatgtagccatattcctctccact 504
Query: 481 tctgtgctatcctttctcaattactctggtttggtcatagtggggtatactgcagttgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctgtgctatcctttctcaattactctggtttggtcatagtggggtatactgcagttgct 564
Query: 541 ctgggagttatttcccttttcccttttgtgttgttgtctttgttttccttgcccaaaatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctgggagttatttcccttttcccttttgtgttgttgtctttgttttccttgcccaaaatt 624
Query: 601 gatcctagcagatgggttagtttaggccaggagaa 635
|||||||||||||||||||||||| ||||||||||
Sbjct: 625 gatcctagcagatgggttagttta-gccaggagaa 658
>gnl|LJGI|GO017331 weakly similar to UniRef100_A7P051 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (34%)
Length = 772
Score = 1227 bits (619), Expect = 0.0
Identities = 647/661 (97%)
Strand = Plus / Minus
Query: 769 acttgtttggcttatataattcctttgttagctgcaactggtgctatgccacttgatcnn 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 acttgtttggcttatataattcctttgttagctgcaactggtgctatgccacttgatcaa 713
Query: 829 nnnnnttgggttggagggtattttgctgatgtggctgggatcattgctgggaattggttg 888
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aaaaattgggttggagggtattttgctgatgtggctgggatcattgctgggaattggttg 653
Query: 889 aaatattggatggaaattggggctgttttgtcaattattggactctatgaagctcaattg 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aaatattggatggaaattggggctgttttgtcaattattggactctatgaagctcaattg 593
Query: 949 agcagtgctgcatatcagcttctaggtatggcagatttaggattcatacctaaaatattt 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 agcagtgctgcatatcagcttctaggtatggcagatttaggattcatacctaaaatattt 533
Query: 1009 ggggaaagatcaaagtggtttaacactccttggatggcaattttggtgtcaacagtgata 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ggggaaagatcaaagtggtttaacactccttggatggcaattttggtgtcaacagtgata 473
Query: 1069 gcaatgggtgtgtctttcttaactttcacagagattatatctactgtgaatttcttgtac 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gcaatgggtgtgtctttcttaactttcacagagattatatctactgtgaatttcttgtac 413
Query: 1129 agtttggggatgcttttggagtttgcttgttttcttaggttgaggagaaaatttccaaca 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agtttggggatgcttttggagtttgcttgttttcttaggttgaggagaaaatttccaaca 353
Query: 1189 ttgaaaaggccatttgaggttccattgggattatttggtctggttctaatgtgcttggtt 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttgaaaaggccatttgaggttccattgggattatttggtctggttctaatgtgcttggtt 293
Query: 1249 ccttctgtgcttttggtttatgtgatgagtgttgctactaaaattgtttatgtggctagt 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ccttctgtgcttttggtttatgtgatgagtgttgctactaaaattgtttatgtggctagt 233
Query: 1309 gctttcttaaccacttttgggatagggctctannnnnnnatgaacctttgcaagtctaag 1368
|||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 232 gctttcttaaccacttttgggatagggctctatttttttatgaacctttgcaagtctaag 173
Query: 1369 aggtggattgaattcagtaaagtaggagataaattggaagaagaggaggatatgatatag 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 aggtggattgaattcagtaaagtaggagataaattggaagaagaggaggatatgatatag 113
Query: 1429 a 1429
|
Sbjct: 112 a 112
>gnl|LJGI|AU251380 similar to UniRef100_A7P051 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 372
Score = 444 bits (224), Expect = e-124
Identities = 332/368 (90%)
Strand = Plus / Plus
Query: 187 gcagggcctctctttgccatccttggctttgtgatcttccctttcatctggagcatccca 246
||||| |||||||||||||||||||| |||||| |||||||||| ||||||||||||||
Sbjct: 1 gcaggccctctctttgccatccttggatttgtggtcttcccttttctctggagcatccca 60
Query: 247 gaggctcttctcacagcagagctagccacaaccttccctggcaatggtggatttgtcata 306
|||||||||||||| || |||||||| ||||| |||||||| |||||||| |||||||||
Sbjct: 61 gaggctcttctcactgctgagctagctacaactttccctggtaatggtgggtttgtcata 120
Query: 307 tgggctaatgaagcctttggacccttttggggctccctcatgggcttctggaaattcttc 366
|||||||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||||
Sbjct: 121 tgggctaatgaagcctttggtcccttctggggctctctcatgggtttctggaagttcttc 180
Query: 367 agtggggtgataaaccttgcctcatacccagttctctgcatagattatctcaagcttgta 426
|||||||| || ||| | || |||| ||||||||| |||||||||||||||||||||||
Sbjct: 181 agtggggttatcaacttggcttcattcccagttctttgcatagattatctcaagcttgtg 240
Query: 427 attccagctttatcctcaggtttacctcactatgtagccatattcctctccacttctgtg 486
||||||||||| || |||||| | ||||||| |||||||||||| || ||||||||||||
Sbjct: 241 attccagctttgtcttcaggtgtgcctcactttgtagccatatttctgtccacttctgtg 300
Query: 487 ctatcctttctcaattactctggtttggtcatagtggggtatactgcagttgctctggga 546
| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 301 ttgtcctttctcaattactctggcttggtcatagttgggtacactgcagttgctctggga 360
Query: 547 gttatttc 554
||||||||
Sbjct: 361 gttatttc 368