Miyakogusa Predicted Gene

Lj4g3v2603880.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2603880.1 Non Chatacterized Hit- tr|J3LRS0|J3LRS0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G3,47.66,4e-19,At5g01610-like,Protein of unknown function
DUF538; no description,Protein of unknown function DUF538,CUFF.51222.1
         (478 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82731 similar to UniRef100_A7P043 Cluster: Chromosome...   948   0.0  

>gnl|LJGI|TC82731 similar to UniRef100_A7P043 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (28%)
          Length = 560

 Score =  948 bits (478), Expect = 0.0
 Identities = 478/478 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctcctcttatcttaaacttgttaattctgtgctccacatccctattccatgtgatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32  atgtctcctcttatcttaaacttgttaattctgtgctccacatccctattccatgtgatt 91

                                                                       
Query: 61  tcttccacatccacagacatccacgaccttctccctgaatacggtttcccaaagggtctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  tcttccacatccacagacatccacgaccttctccctgaatacggtttcccaaagggtctc 151

                                                                       
Query: 121 atccccaacaacgcaatctcctacaccatctccaccgatggcttcttcacaatccagctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 atccccaacaacgcaatctcctacaccatctccaccgatggcttcttcacaatccagctc 211

                                                                       
Query: 181 gattccccctgctacgtccacttctccgaccagtacttagtctacttccacacccgcctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gattccccctgctacgtccacttctccgaccagtacttagtctacttccacacccgcctc 271

                                                                       
Query: 241 accggaaaactctcctacggctccgtcacaagagtctccgggatccaggcccagatactc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 accggaaaactctcctacggctccgtcacaagagtctccgggatccaggcccagatactc 331

                                                                       
Query: 301 ttcctctggccctccgttaccggaatcaaggtccacaaggactccggcatgctcgagttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ttcctctggccctccgttaccggaatcaaggtccacaaggactccggcatgctcgagttc 391

                                                                       
Query: 361 tttgctggagctttgtcgcagaaacttccggcggaggagtttgtgaatgtgccggggtgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttgctggagctttgtcgcagaaacttccggcggaggagtttgtgaatgtgccggggtgc 451

                                                                     
Query: 421 tcccccaaggcttgtcaaggaggatccactgcaaccaacctcgtggatcgcgtgtgaa 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tcccccaaggcttgtcaaggaggatccactgcaaccaacctcgtggatcgcgtgtgaa 509