Miyakogusa Predicted Gene

Lj4g3v2603860.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2603860.1 Non Chatacterized Hit- tr|H3JFB7|H3JFB7_STRPU
Uncharacterized protein OS=Strongylocentrotus
purpurat,34.04,0.00000000000002,Med10,Mediator complex, subunit Med10;
seg,NULL; NUT2,NULL; NUT2 AND UXT,NULL,CUFF.51220.1
         (588 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73549 similar to UniRef100_A7QJ60 Cluster: Chromosome...   363   e-100

>gnl|LJGI|TC73549 similar to UniRef100_A7QJ60 Cluster: Chromosome chr2 scaffold_105,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_105, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (78%)
          Length = 1228

 Score =  363 bits (183), Expect = e-100
 Identities = 370/438 (84%)
 Strand = Plus / Plus

                                                                       
Query: 151 attcagagaactctgggcattatccatcagctttaccttactgtatctacctacaatgct 210
           ||||||| |||  ||||| |||||||||||||||||||||| || ||||||| |||||||
Sbjct: 256 attcagaaaaccttgggccttatccatcagctttaccttacagtctctaccttcaatgct 315

                                                                       
Query: 211 gcctttcaaatgcctctcctccaacgcatcaatgtgctggttggggagcttgacaccatg 270
           ||||||||||||||||||||| |||| |||||||  || |||| ||||||||||| ||||
Sbjct: 316 gcctttcaaatgcctctcctcgaacgaatcaatggtctagttgaggagcttgacaacatg 375

                                                                       
Query: 271 gttaaattggcagagaagtgcaatgttcaggttcctatggaggttgtgaatttgattgat 330
           || ||||||||||||||||||||  |||| ||||| ||||||||||||||||| ||||||
Sbjct: 376 gtcaaattggcagagaagtgcaacattcatgttccaatggaggttgtgaatttaattgat 435

                                                                       
Query: 331 gacgggaagaatccggatgagtttaccaaagatgttataaacaactgcatagcaaagaat 390
           || ||||||||||| ||||| ||||||||||||||||| |||||||| || || ||||||
Sbjct: 436 gatgggaagaatccagatgaatttaccaaagatgttattaacaactgtattgccaagaat 495

                                                                       
Query: 391 cagatcaccaaaggaaaaactgacgcattaaaggattttcgcaagcaccttttcgaggaa 450
           |||||||||||||||||||| ||||  |||||| || | |||||||| ||||| | ||||
Sbjct: 496 cagatcaccaaaggaaaaacagacggtttaaagaatctgcgcaagcagcttttgggggaa 555

                                                                       
Query: 451 ttggagcaaaactttcctgatgaggttgaaacttttagagagagtcgnnnnnnnnnnnnn 510
           |||||||| ||||| || ||||||||||| |||| |||||||| |||             
Sbjct: 556 ttggagcagaacttcccagatgaggttgagacttatagagagactcgtgctgctgctgct 615

                                                                       
Query: 511 nnnnagttgaaacgtctggcacaagcacaaagtgcactaccaaatggggatgtgagggtt 570
               ||||||| ||| ||||||| ||||||| || |||| ||||||| |||| |||||||
Sbjct: 616 gccgagttgaagcgtatggcacaggcacaaaatgtactatcaaatggagatgcgagggtt 675

                             
Query: 571 aaagcagagcattgaatg 588
           ||| ||||||||||||||
Sbjct: 676 aaatcagagcattgaatg 693