Miyakogusa Predicted Gene

Lj4g3v2603760.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2603760.1 tr|G7LHV5|G7LHV5_MEDTR Small ubiquitin-related
modifier OS=Medicago truncatula GN=MTR_8g085320 PE=4 ,46.32,1e-16,no
description,NULL; Rad60-SLD,Small ubiquitin-related modifier, SUMO;
Ubiquitin-like,NULL,gene.g57057.t1.1
         (309 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO026459 similar to UniRef100_A4XW47 Cluster: Flagellar...   613   e-175
gnl|LJGI|BP048398 similar to UniRef100_Q12W56 Cluster: Ribonucle...   133   7e-31

>gnl|LJGI|GO026459 similar to UniRef100_A4XW47 Cluster: Flagellar biosynthesis protein
           FlhA; n=1; Pseudomonas mendocina ymp|Rep: Flagellar,
           partial (2%)
          Length = 529

 Score =  613 bits (309), Expect = e-175
 Identities = 309/309 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggttccagtagtcaaccgagcaagagaaaggccccaactgaagaggctggtcctgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  atgggttccagtagtcaaccgagcaagagaaaggccccaactgaagaggctggtcctgct 130

                                                                       
Query: 61  gattatgtccacttttcaatcaagggtcaggatgggcgtcaattgttcttcaaggtgaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gattatgtccacttttcaatcaagggtcaggatgggcgtcaattgttcttcaaggtgaac 190

                                                                       
Query: 121 aaggaggccaagttatttaatgcattcagtagctactgtgagcgagtgaacttggaatat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aaggaggccaagttatttaatgcattcagtagctactgtgagcgagtgaacttggaatat 250

                                                                       
Query: 181 gagaccatgcagtttttacatgatggtcagtatgtcaaagggaaacgtcaaacaccaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gagaccatgcagtttttacatgatggtcagtatgtcaaagggaaacgtcaaacaccaaaa 310

                                                                       
Query: 241 atgctcaatctgaaaaatggtgatgagatcgttgcagtgagacaccaatcaggaggaggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atgctcaatctgaaaaatggtgatgagatcgttgcagtgagacaccaatcaggaggaggt 370

                    
Query: 301 gttgcataa 309
           |||||||||
Sbjct: 371 gttgcataa 379


>gnl|LJGI|BP048398 similar to UniRef100_Q12W56 Cluster: Ribonuclease BN; n=1;
           Methanococcoides burtonii DSM 6242|Rep: Ribonuclease BN
           - Methanococcoides burtonii (strain DSM 6242), partial
           (5%)
          Length = 582

 Score =  133 bits (67), Expect = 7e-31
 Identities = 67/67 (100%)
 Strand = Plus / Minus

                                                                       
Query: 243 gctcaatctgaaaaatggtgatgagatcgttgcagtgagacaccaatcaggaggaggtgt 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gctcaatctgaaaaatggtgatgagatcgttgcagtgagacaccaatcaggaggaggtgt 120

                  
Query: 303 tgcataa 309
           |||||||
Sbjct: 119 tgcataa 113