Miyakogusa Predicted Gene
- Lj4g3v2603750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2603750.1 Non Chatacterized Hit- tr|I1K3U4|I1K3U4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48845
PE,78.43,0,seg,NULL; Domain in Tre-2, BUB2p, and Cdc16p.
Probable,Rab-GTPase-TBC domain; TBC1 DOMAIN FAMILY MEM,CUFF.51211.1
(1299 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58759 similar to UniRef100_A7QHM3 Cluster: Chromosome... 2567 0.0
gnl|LJGI|TC69361 homologue to UniRef100_A7QHM3 Cluster: Chromoso... 448 e-125
gnl|LJGI|FS336750 similar to UniRef100_A7QHM3 Cluster: Chromosom... 74 2e-12
>gnl|LJGI|TC58759 similar to UniRef100_A7QHM3 Cluster: Chromosome chr5 scaffold_98,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_98, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 1616
Score = 2567 bits (1295), Expect = 0.0
Identities = 1298/1299 (99%)
Strand = Plus / Plus
Query: 1 atggtgaagaagaaagtccccgattggctcaacagctctctctggtcatcaccaattacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atggtgaagaagaaagtccccgattggctcaacagctctctctggtcatcaccaattacc 123
Query: 61 actcctccttcctccgccgcggtcgaagacatccccgccgtcgtcacctcaccggaaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 actcctccttcctccgccgcggtcgaagacatccccgccgtcgtcacctcaccggaaccg 183
Query: 121 ccacgacctccttcccctcccgtcatcatccaagatcctccacaggcacagaaaatccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ccacgacctccttcccctcccgtcatcatccaagatcctccacaggcacagaaaatccag 243
Query: 181 gactcgcgatccgacgatgacggcgacacatccccttctttctccgcccgcgatgtccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gactcgcgatccgacgatgacggcgacacatccccttctttctccgcccgcgatgtccct 303
Query: 241 caccaggctcagttgttggccgagttgtcgaggaaggtgattgatattcgggagttgcgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 caccaggctcagttgttggccgagttgtcgaggaaggtgattgatattcgggagttgcgg 363
Query: 301 aagctcgcgtgtgatggtgtacctgatgcttctgggatacgctccaccgtgtggaagctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aagctcgcgtgtgatggtgtacctgatgcttctgggatacgctccaccgtgtggaagctt 423
Query: 361 ttgcttggatatcttccgccagatcgagggctttggtcatctgaattagcgaagaagaga 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttgcttggatatcttctgccagatcgagggctttggtcatctgaattagcgaagaagaga 483
Query: 421 acccagtacaagcagttcaaagaggaggttctcatgaatccttcagaaataacatggaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 acccagtacaagcagttcaaagaggaggttctcatgaatccttcagaaataacatggaag 543
Query: 481 atgtacaactcccttagttgtgatagtgatgaagccaaatgtgagagggccttgctctcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 atgtacaactcccttagttgtgatagtgatgaagccaaatgtgagagggccttgctctcc 603
Query: 541 agatcagaaatcactcatggggagcaccctttaagccttgggaagaccagcgtatggaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 agatcagaaatcactcatggggagcaccctttaagccttgggaagaccagcgtatggaat 663
Query: 601 cagttcttccaggacacagagatcatagatcagattgaccgagatgtgatgcgcactcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cagttcttccaggacacagagatcatagatcagattgaccgagatgtgatgcgcactcat 723
Query: 661 cctgatatgcacttcttctctggtgattctcaatttgcaaaactgaatcaggaggcttta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 cctgatatgcacttcttctctggtgattctcaatttgcaaaactgaatcaggaggcttta 783
Query: 721 aagaacatactaattattttcgccaagttaaacccaggtgtaagatatgttcaagggatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 aagaacatactaattattttcgccaagttaaacccaggtgtaagatatgttcaagggatg 843
Query: 781 aatgaggtattggctcctctgttctatgtgttcaagaatgaccctgatgaggaaaattcg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 aatgaggtattggctcctctgttctatgtgttcaagaatgaccctgatgaggaaaattcg 903
Query: 841 gcctttgctgaagctgatacgttcttttgttttgttgagctattgagtgggttccgagat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 gcctttgctgaagctgatacgttcttttgttttgttgagctattgagtgggttccgagat 963
Query: 901 aactttgttcaacaattagacaacagtgctgttggaatccgtgcaactattacaagattg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 aactttgttcaacaattagacaacagtgctgttggaatccgtgcaactattacaagattg 1023
Query: 961 tctcagcttttaaaagaacatgatgaagagctgtggcgtcatcttgagatcacttctaaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 tctcagcttttaaaagaacatgatgaagagctgtggcgtcatcttgagatcacttctaaa 1083
Query: 1021 gtcaatccccaattctatgcatttaggtggatcactctcctgctaactcaagaattcaat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 gtcaatccccaattctatgcatttaggtggatcactctcctgctaactcaagaattcaat 1143
Query: 1081 ttcgctgacagcattcacatttgggacactattttaagtgatccagagggtccacaggag 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 ttcgctgacagcattcacatttgggacactattttaagtgatccagagggtccacaggag 1203
Query: 1141 actcttctccggatatgctgtgcaatgctaattctgattcgtaagcgcctccttgccggt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 actcttctccggatatgctgtgcaatgctaattctgattcgtaagcgcctccttgccggt 1263
Query: 1201 gatttcacttctaatctgaagttgctgcaaaattatcccactacaaacattagtcatttg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 gatttcacttctaatctgaagttgctgcaaaattatcccactacaaacattagtcatttg 1323
Query: 1261 ctctatgttgccaataagtttcgtgtacagtcaatctaa 1299
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 ctctatgttgccaataagtttcgtgtacagtcaatctaa 1362
>gnl|LJGI|TC69361 homologue to UniRef100_A7QHM3 Cluster: Chromosome chr5 scaffold_98,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_98, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 691
Score = 448 bits (226), Expect = e-125
Identities = 397/454 (87%)
Strand = Plus / Plus
Query: 839 cggcctttgctgaagctgatacgttcttttgttttgttgagctattgagtgggttccgag 898
|||||||||||||||| ||||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 3 cggcctttgctgaagcagatacattcttttgttttgttgaattattgagtggactccgag 62
Query: 899 ataactttgttcaacaattagacaacagtgctgttggaatccgtgcaactattacaagat 958
|||| ||| |||||| | ||||| |||| |||||||||||| |||| ||||||||||
Sbjct: 63 ataatttttgccaacaacttgacaatagtgtggttggaatccgttcaaccattacaagat 122
Query: 959 tgtctcagcttttaaaagaacatgatgaagagctgtggcgtcatcttgagatcacttcta 1018
|||| |||||||||||||||||||||||||| ||||||||||||||||| |||| |||
Sbjct: 123 tgtcccagcttttaaaagaacatgatgaagaactgtggcgtcatcttgaagtcacgacta 182
Query: 1019 aagtcaatccccaattctatgcatttaggtggatcactctcctgctaactcaagaattca 1078
||||||||||||| || ||| ||||||||||||| |||||||| ||||||| ||||| |
Sbjct: 183 aagtcaatccccagttttattcatttaggtggattactctcctcttaactcaggaattta 242
Query: 1079 atttcgctgacagcattcacatttgggacactattttaagtgatccagagggtccacagg 1138
||||| ||| | | |||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 243 atttccatgatatccttcatatttgggatacccttttaagtgatccagagggtccacagg 302
Query: 1139 agactcttctccggatatgctgtgcaatgctaattctgattcgtaagcgcctccttgccg 1198
|||| || ||||||||||| |||||||||||||| || |||| | ||||||||| || |
Sbjct: 303 agacactgctccggatatgttgtgcaatgctaatactcgttcgaaggcgcctcctagcgg 362
Query: 1199 gtgatttcacttctaatctgaagttgctgcaaaattatcccactacaaacattagtcatt 1258
||||||||||||||||||| ||||||||||||| ||||||| |||||||||| |||||||
Sbjct: 363 gtgatttcacttctaatctcaagttgctgcaaagttatccctctacaaacatcagtcatt 422
Query: 1259 tgctctatgttgccaataagtttcgtgtacagtc 1292
||||| |||||||||||||||| |||| ||||||
Sbjct: 423 tgctccatgttgccaataagttacgtgcacagtc 456
>gnl|LJGI|FS336750 similar to UniRef100_A7QHM3 Cluster: Chromosome chr5 scaffold_98,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_98, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 563
Score = 73.8 bits (37), Expect = 2e-12
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 322 cctgatgcttctgggatacgctccaccgtgtggaagcttttgcttggatatcttccgcca 381
|||||||||||||| | || || || || ||||||||||||||||| |||||||||| |
Sbjct: 472 cctgatgcttctggtttgcgttctacagtctggaagcttttgcttgggtatcttccgcaa 531
Query: 382 gatcgagggctttggtcatctgaattagc 410
||||| | |||||||| |||||||||||
Sbjct: 532 gatcgcgccctttggtcctctgaattagc 560