Miyakogusa Predicted Gene
- Lj4g3v2603650.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2603650.1 tr|I0Z5S5|I0Z5S5_9CHLO Terpenoid cyclases/Protein
prenyltransferase (Fragment) OS=Coccomyxa
subellip,26.7,0.00000000002,Terpenoid cyclases/Protein
prenyltransferases,Terpenoid cyclases/protein prenyltransferase
alpha-alp,CUFF.51215.1
(945 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69702 similar to UniRef100_Q84J75 Cluster: At5g12210;... 1505 0.0
gnl|LJGI|BP078304 similar to UniRef100_Q3E7I9 Cluster: Uncharact... 644 0.0
gnl|LJGI|BP046669 similar to UniRef100_Q9LHL5 Cluster: Geranylge... 468 e-131
gnl|LJGI|BW607658 299 2e-80
>gnl|LJGI|TC69702 similar to UniRef100_Q84J75 Cluster: At5g12210; n=2; Arabidopsis
thaliana|Rep: At5g12210 - Arabidopsis thaliana
(Mouse-ear cress), partial (89%)
Length = 1150
Score = 1505 bits (759), Expect = 0.0
Identities = 768/771 (99%)
Strand = Plus / Plus
Query: 1 atgggagagctggtttctgagaaacatgttcgatatatattatctgttgaaaagaggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atgggagagctggtttctgagaaacatgttcgatatatattatctgttgaaaagaggaaa 189
Query: 61 gataattttgaatcggtggtgatggagcatctgagaatgaatggggcatactggggattg 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 190 gataattttgaatcggtggtgatggagcatctgagaatgaatggggcgtactggggattg 249
Query: 121 actgctctggatctgctggggaagctgcacactgtggatgttgatgaggttgtttcatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 actgctctggatctgctggggaagctgcacactgtggatgttgatgaggttgtttcatgg 309
Query: 181 gtgatgagttgtcaggatgagtcagggggatttgctggaaatgttggacatgacccacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gtgatgagttgtcaggatgagtcagggggatttgctggaaatgttggacatgacccacac 369
Query: 241 atcttgtatacgcttagcgctgtgcaggtgttggctctctttgataagctggatgctatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 370 atcttgtatacgcttagcgctgtgcaggtgttggctctctttgataagctgtatgctatt 429
Query: 301 gatgtagatagggtgacaaattatattgtcagcctccaaaatgaagatggatctttttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gatgtagatagggtgacaaattatattgtcagcctccaaaatgaagatggatctttttca 489
Query: 361 ggggatacgtggggtgaagttgatacacggttttcatatattgctatttgttgtctatcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ggggatacgtggggtgaagttgatacacggttttcatatattgctatttgttgtctatcg 549
Query: 421 atattacgtcgcttggataaaatcaatgtggagaaggctgtgaagtacattataagttgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 atattacgtcgcttggataaaatcaatgtggagaaggctgtgaagtacattataagttgc 609
Query: 481 aaaaacatggatggtggttttggttgcacacctggtggagaatctcatgctggacaaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aaaaacatggatggtggttttggttgcacacctggtggagaatctcatgctggacaaatt 669
Query: 541 ttctgttgtgtgggggcgcttgctataactgggtcactagatcttgttgacaaggaccta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ttctgttgtgtgggggcgcttgctataactgggtcactagatcttgttgacaaggaccta 729
Query: 601 cttggttggtggttatgcgagcgacaagttaaatctggaggtctgaatgggcgtcctgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 cttggttggtggttatgcgagcgacaagttaaatctggaggtctgaatgggcgtcctgag 789
Query: 661 aagctccctgatgtgtgctactcatggtgggttctttctagcctgatcatgattgatagg 720
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 790 aagctccctgatgtgtgctactcatggtgggttccttctagcctgatcatgattgatagg 849
Query: 721 gttcattggatcagtaaggagaaacttataaagttcatcttagactgccag 771
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 gttcattggatcagtaaggagaaacttataaagttcatcttagactgccag 900
Score = 301 bits (152), Expect = 4e-81
Identities = 152/152 (100%)
Strand = Plus / Plus
Query: 794 cagataggccagacgatgctgtggatgtctttcatacttacttcggggtggctggtcttt 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 cagataggccagacgatgctgtggatgtctttcatacttacttcggggtggctggtcttt 957
Query: 854 cacttcttgaatatccaggattgaaaccgatagatccagcttatgctttacctgttgatg 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 cacttcttgaatatccaggattgaaaccgatagatccagcttatgctttacctgttgatg 1017
Query: 914 tagtaaatcgaatcttctttagtaagtaaaga 945
||||||||||||||||||||||||||||||||
Sbjct: 1018 tagtaaatcgaatcttctttagtaagtaaaga 1049
>gnl|LJGI|BP078304 similar to UniRef100_Q3E7I9 Cluster: Uncharacterized protein
At5g12210.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At5g12210.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (37%)
Length = 441
Score = 644 bits (325), Expect = 0.0
Identities = 358/369 (97%)
Strand = Plus / Minus
Query: 574 tcactagatcttgttgacaaggacctacttggttggtggttatgcgagcgacaagttaaa 633
|||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 441 tcactagatcttgtagacaaggacctactcggttggtggttatgtgagcgacaagttaaa 382
Query: 634 tctggaggtctgaatgggcgtcctgagaagctccctgatgtgtgctactcatggtgggtt 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctggaggtctgaatgggcgtcctgagaagctccctgatgtgtgctactcatggtgggtt 322
Query: 694 ctttctagcctgatcatgattgatagggttcattggatcagtaaggagaaacttataaag 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttctagcctgatcatgattgatagggttcattggatcagtaaggagaaacttataaag 262
Query: 754 ttcatcttagactgccaggacacggagaatggtggaatttcagataggccagacgatgct 813
||||||||||||||||||||||| |||||||| ||||||||||| |||||||| ||||||
Sbjct: 261 ttcatcttagactgccaggacacagagaatggaggaatttcagacaggccagatgatgct 202
Query: 814 gtggatgtctttcatacttacttcggggtggctggtctttcacttcttgaatatccagga 873
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 201 gtggatgtctttcatacttactttggggtggctggactttcacttcttgaatatcctgga 142
Query: 874 ttgaaaccgatagatccagcttatgctttacctgttgatgtagtaaatcgaatcttcttt 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 141 ttgaaaccgatagatccagcttatgctttacctgttgatgtagtaaatcgaatcttcatt 82
Query: 934 agtaagtaa 942
|||||||||
Sbjct: 81 agtaagtaa 73
>gnl|LJGI|BP046669 similar to UniRef100_Q9LHL5 Cluster: Geranylgeranyl transferase
beta subunit; n=1; Arabidopsis thaliana|Rep:
Geranylgeranyl transferase beta subunit - Arabidopsis
thaliana (Mouse-ear cress), partial (31%)
Length = 531
Score = 468 bits (236), Expect = e-131
Identities = 278/292 (95%)
Strand = Plus / Minus
Query: 244 ttgtatacgcttagcgctgtgcaggtgttggctctctttgataagctggatgctattgat 303
||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 531 ttgtatacgcttagcgcggtgcaggtgttggctctctttaataagctggatgttattgat 472
Query: 304 gtagatagggtgacaaattatattgtcagcctccaaaatgaagatggatctttttcaggg 363
|||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 471 gtagatagggtgaccaattatattgtcagcctcccaaatgaagatggatccttttcaggg 412
Query: 364 gatacgtggggtgaagttgatacacggttttcatatattgctatttgttgtctatcgata 423
|||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 411 gatatgtggggtgaagttgatacacggttctcatatattgctgtttgttgtctatcgata 352
Query: 424 ttacgtcgcttggataaaatcaatgtggagaaggctgtgaagtacattataagttgcaaa 483
|||||| |||||||||||||| |||||||||||||||||||||| |||||||||||| ||
Sbjct: 351 ttacgttgcttggataaaatccatgtggagaaggctgtgaagtatattataagttgccaa 292
Query: 484 aacatggatggtggttttggttgcacacctggtggagaatctcatgctggac 535
||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 291 aacatggatggtggttttggttgcacacctggtggggaatctcatgctggac 240
>gnl|LJGI|BW607658
Length = 475
Score = 299 bits (151), Expect = 2e-80
Identities = 172/179 (96%)
Strand = Plus / Plus
Query: 1 atgggagagctggtttctgagaaacatgttcgatatatattatctgttgaaaagaggaaa 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atggaagagctggtttctgagaaacatgttcgatatatattatctgttgaaaagaggaaa 356
Query: 61 gataattttgaatcggtggtgatggagcatctgagaatgaatggggcatactggggattg 120
|||||||||||||| ||||||||||||||||| |||||||||||||| || |||||||||
Sbjct: 357 gataattttgaatctgtggtgatggagcatctaagaatgaatggggcttattggggattg 416
Query: 121 actgctctggatctgctggggaagctgcacactgtggatgttgatgaggttgtttcatg 179
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 417 actgctctggatctgctgggaaagcttcacactgtggatgttgatgaggttgtttcatg 475