Miyakogusa Predicted Gene
- Lj4g3v2578190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2578190.1 Non Chatacterized Hit- tr|F6I4D0|F6I4D0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,28.31,0.000000000009,coiled-coil,NULL; seg,NULL,CUFF.51179.1
(3720 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC597852 similar to UniRef100_A0YBA4 Cluster: FadD19_2;... 1108 0.0
gnl|LJGI|BP084487 UniRef100_Q697H2 Cluster: NADH-ubiquinone oxid... 256 9e-67
gnl|LJGI|TC82447 weakly similar to UniRef100_A9XB71 Cluster: Cyt... 202 1e-50
>gnl|LJGI|DC597852 similar to UniRef100_A0YBA4 Cluster: FadD19_2; n=1; marine gamma
proteobacterium HTCC2143|Rep: FadD19_2 - marine gamma,
partial (2%)
Length = 568
Score = 1108 bits (559), Expect = 0.0
Identities = 562/563 (99%)
Strand = Plus / Plus
Query: 1 atggaagaaaccctaatctcccgaaaacggagcaatccttcttcatcaccgcccggtgca 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 atggaagaaaccctaatctgccgaaaacggagcaatccttcttcatcaccgcccggtgca 65
Query: 61 ctcacccgcagtagatcccagctctttgttcatcgcaaccgctccggccaacgccgccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ctcacccgcagtagatcccagctctttgttcatcgcaaccgctccggccaacgccgccct 125
Query: 121 gattccggtccgagacagggtggcctctactccggtctcggtggctcttctggaaatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gattccggtccgagacagggtggcctctactccggtctcggtggctcttctggaaatgat 185
Query: 181 gaaaagcgagaaccaccggaggaggacgacggcgacacccttctcgtcaagtatcttcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gaaaagcgagaaccaccggaggaggacgacggcgacacccttctcgtcaagtatcttcgg 245
Query: 241 aagaaagcgaagcgtgacgatgatggcggagacctacctcgccttctgacaaaggacttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aagaaagcgaagcgtgacgatgatggcggagacctacctcgccttctgacaaaggacttg 305
Query: 301 cgcgcgcggcgagtttattccccacaatccagcgctcgtgcttccttagatttgatcgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 cgcgcgcggcgagtttattccccacaatccagcgctcgtgcttccttagatttgatcgat 365
Query: 361 tccgattgcgcagatcggaaaattgcaggtttagggtttggatcgccgtcgagtgaggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tccgattgcgcagatcggaaaattgcaggtttagggtttggatcgccgtcgagtgaggaa 425
Query: 421 aagagtggtgtgcatgttgatgatgtgatgattgctgtcaattctgattgcacggatcgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aagagtggtgtgcatgttgatgatgtgatgattgctgtcaattctgattgcacggatcgg 485
Query: 481 aaaattgctgatttagggtttggatcatcagcagaaaaaggtggtttgtgtgtggatgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aaaattgctgatttagggtttggatcatcagcagaaaaaggtggtttgtgtgtggatgat 545
Query: 541 gcgacgatgaaagtgactgtgag 563
|||||||||||||||||||||||
Sbjct: 546 gcgacgatgaaagtgactgtgag 568
>gnl|LJGI|BP084487 UniRef100_Q697H2 Cluster: NADH-ubiquinone oxidoreductase chain 6;
n=1; Aleurochiton aceris|Rep: NADH-ubiquinone
oxidoreductase chain 6 - Aleurochiton aceris, partial
(7%)
Length = 368
Score = 256 bits (129), Expect = 9e-67
Identities = 129/129 (100%)
Strand = Plus / Minus
Query: 3592 cttgccaaagagcgccttagcatgatgaaagatgatcttagcatccattgcagaataaca 3651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cttgccaaagagcgccttagcatgatgaaagatgatcttagcatccattgcagaataaca 309
Query: 3652 aacttgcagcgaccaagggttagatttgcagatcatgtccaagaaaaaatcatcaaagga 3711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aacttgcagcgaccaagggttagatttgcagatcatgtccaagaaaaaatcatcaaagga 249
Query: 3712 cgcagataa 3720
|||||||||
Sbjct: 248 cgcagataa 240
>gnl|LJGI|TC82447 weakly similar to UniRef100_A9XB71 Cluster: Cytochrome b; n=1; Cervus
elaphus|Rep: Cytochrome b - Cervus elaphus (Red deer),
partial (6%)
Length = 536
Score = 202 bits (102), Expect = 1e-50
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 3550 caggtgaaagaagcctgtaggaaagcgtatgcagcagaacaacttgccaaagagcgcctt 3609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 caggtgaaagaagcctgtaggaaagcgtatgcagcagaacaacttgccaaagagcgcctt 72
Query: 3610 agcatgatgaaagatgatcttagcatccattgcagaataaca 3651
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 agcatgatgaaagatgatcttagcatccattgcagaataaca 114
Score = 137 bits (69), Expect = 6e-31
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 3652 aacttgcagcgaccaagggttagatttgcagatcatgtccaagaaaaaatcatcaaagga 3711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aacttgcagcgaccaagggttagatttgcagatcatgtccaagaaaaaatcatcaaagga 249
Query: 3712 cgcagataa 3720
|||||||||
Sbjct: 250 cgcagataa 258