Miyakogusa Predicted Gene

Lj4g3v2577140.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2577140.1 Non Chatacterized Hit- tr|E0VHT4|E0VHT4_PEDHC
Putative uncharacterized protein OS=Pediculus humanus
,26.06,0.0000006,seg,NULL; Med18,Mediator complex, subunit Med18,
metazoa/fungi,CUFF.51164.1
         (585 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67019 similar to UniRef100_A7NTK7 Cluster: Chromosome...   916   0.0  

>gnl|LJGI|TC67019 similar to UniRef100_A7NTK7 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 805

 Score =  916 bits (462), Expect = 0.0
 Identities = 462/462 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaatgcgtggttcagggaattatagagacacagcatgttgaggcccttgagattctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 atggaatgcgtggttcagggaattatagagacacagcatgttgaggcccttgagattctt 200

                                                                       
Query: 61  cttcaaggactatgtggtgttcagagagaacgattgaggatccatgaaatatgcctcaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcaaggactatgtggtgttcagagagaacgattgaggatccatgaaatatgcctcaag 260

                                                                       
Query: 121 aatggtccaaatctaggcaatgtggcctcagaggttcgactcttatgtgatctagagcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatggtccaaatctaggcaatgtggcctcagaggttcgactcttatgtgatctagagcag 320

                                                                       
Query: 181 gctgagccctcatggactgttaaacatatcggtggtccaattagaggtgctggtgctgac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgagccctcatggactgttaaacatatcggtggtccaattagaggtgctggtgctgac 380

                                                                       
Query: 241 caaatttcagttctggttaggaacatggtggaaagcaaagcgagcaagaatgtgctccgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaatttcagttctggttaggaacatggtggaaagcaaagcgagcaagaatgtgctccgt 440

                                                                       
Query: 301 atgttttatacactggggtacaagttagatcatgagctcctgagggtggggttttccttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgttttatacactggggtacaagttagatcatgagctcctgagggtggggttttccttc 500

                                                                       
Query: 361 cagttctacaggggtgcgcaaatcactgtaacggtttcatcaatcaataaaatgccaaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagttctacaggggtgcgcaaatcactgtaacggtttcatcaatcaataaaatgccaaag 560

                                                     
Query: 421 ctgcacgcaactgatgaggctgagccagtaacacctggtata 462
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgcacgcaactgatgaggctgagccagtaacacctggtata 602



 Score =  236 bits (119), Expect = 1e-61
 Identities = 122/123 (99%)
 Strand = Plus / Plus

                                                                       
Query: 463 atactgaagttgcttctgctgtgtcatccttttgtgaataccttgcaccgcttctccatc 522
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 atactgaagttgcttctgctgtgtcatccttttgtgaataccttgcaccgcttctccatc 702

                                                                       
Query: 523 tgtccaaaccaggcatctcaaccggtgttgttcctactgctgctgcagctgctgcatctc 582
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tgtccaaaccaggcatcccaaccggtgttgttcctactgctgctgcagctgctgcatctc 762

              
Query: 583 taa 585
           |||
Sbjct: 763 taa 765