Miyakogusa Predicted Gene

Lj4g3v2577130.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2577130.1 Non Chatacterized Hit- tr|Q8W4K0|Q8W4K0_ARATH
Putative uncharacterized protein At4g14190
OS=Arabidop,32.99,4e-16,seg,NULL,CUFF.51163.1
         (2010 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BU494187 weakly similar to UniRef100_A7QQS4 Cluster: Ch...   904   0.0  
gnl|LJGI|TC73628 similar to UniRef100_A7QQS4 Cluster: Chromosome...   504   e-141

>gnl|LJGI|BU494187 weakly similar to UniRef100_A7QQS4 Cluster: Chromosome undetermined
            scaffold_144, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_144, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (17%)
          Length = 464

 Score =  904 bits (456), Expect = 0.0
 Identities = 463/464 (99%), Gaps = 1/464 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1069 gtgaaggctgcagaagaccttgccaggaagtatacatcatttacttctttaaatactgag 1128
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gtgaaggctgcagaagaccttgccaggaagtatacatcatttacttctttaaatactgag 60

                                                                        
Query: 1129 ccttctgctcagcatgatgctgctgttgaaggtaatccaggtggagaacatagtgaggat 1188
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ccttctgctcagcatgatgctgctgttgaaggtaatccaggtggagaacatagtgaggat 120

                                                                        
Query: 1189 gtgactttggttactgctgtgcctgttcaagatcaaagtggtaataatttggttaaacat 1248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gtgactttggttactgctgtgcctgttcaagatcaaagtggtaataatttggttaaacat 180

                                                                        
Query: 1249 agttcatctggatttgatgcttcagtttactctagtagccgttgtgacagtttggaaggc 1308
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  agttcatctggatttgatgcttcagtttactctagtagccgttgtgacagtttggaaggc 240

                                                                        
Query: 1309 cactggggttctgtttcagttttctctatgcaatccaatgcaccatcggggactgatact 1368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  cactggggttctgtttcagttttctctatgcaatccaatgcaccatcggggactgatact 300

                                                                        
Query: 1369 gaaattttaccatcaaccggttcactagcatcagcagaggcggcggataaatcctacttg 1428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gaaattttaccatcaaccggttcactagcatcagcagaggcggcggataaatcctacttg 360

                                                                        
Query: 1429 aacattccaaaagcagaagctgcatctgagagacagcagt-ccggaaaatcagaaatgct 1487
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 361  aacattccaaaagcagaagctgcatctgagagacagcagtcccggaaaatcagaaatgct 420

                                                        
Query: 1488 cgaacctccgtcgttcatgacattggttgagtctagccatgtgg 1531
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  cgaacctccgtcgttcatgacattggttgagtctagccatgtgg 464


>gnl|LJGI|TC73628 similar to UniRef100_A7QQS4 Cluster: Chromosome undetermined
            scaffold_144, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_144, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (10%)
          Length = 508

 Score =  504 bits (254), Expect = e-141
 Identities = 284/294 (96%)
 Strand = Plus / Plus

                                                                        
Query: 1717 aagagcctattaggcgaggctgcaaatagcagcagcaagcctgaatctccaaaaacggaa 1776
            |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 1    aagagcctattaggcgaggctgcaaatagcagcagcaagcctgaatctcccaacacggaa 60

                                                                        
Query: 1777 gaacattcagtgactcagaagaatggtaacaatggttctggattgaaaactgttaactct 1836
            | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61   gcacattcagtgactcagaagaatggtaaccatggttctggattgaaaactgttaactct 120

                                                                        
Query: 1837 attctgggtcctgaatcccctggagatcaagtggtgaaaggagatgctgcaaaagaatgg 1896
            |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 121  attctgggtcctgaatcccctggagatccagtggtgaaaggagatgctgccaaagaatgg 180

                                                                        
Query: 1897 aactctccggcaagatatcctgcaggcatcaagagagaaaaaagcaaaatcaagagcaga 1956
            ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 181  aactctccggccagatatcctgcaggcatcaagagagaaaaaagccaaatcaagagcaga 240

                                                                  
Query: 1957 ccattctggatacaattggtgtgctgttcatcagtggatcctcaacgaaggtag 2010
            || |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  cccttctggataccattggtgtgctgttcatcagtggatcctcaacgaaggtag 294