Miyakogusa Predicted Gene
- Lj4g3v2576090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2576090.1 tr|G7JBC0|G7JBC0_MEDTR Protein transport protein
Sec23 OS=Medicago truncatula GN=MTR_3g084740 PE=4
S,74.3,0,vWA-like,NULL; Zn-finger domain of Sec23/24,Zinc finger,
Sec23/Sec24-type; beta-sandwich domain of S,TC62100.path2.1
(639 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62100 similar to UniRef100_A7QQS7 Cluster: Chromosome... 1259 0.0
gnl|LJGI|FS322399 similar to UniRef100_A7QJV5 Cluster: Chromosom... 98 8e-20
gnl|LJGI|TC76285 similar to UniRef100_Q93ZN7 Cluster: At1g05520/... 88 8e-17
>gnl|LJGI|TC62100 similar to UniRef100_A7QQS7 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (25%)
Length = 816
Score = 1259 bits (635), Expect = 0.0
Identities = 638/639 (99%)
Strand = Plus / Plus
Query: 1 atggcgcacttagcagatccagaaggcattgacggcgtacgcatgacctggaacgtctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 atggcgcacttagcagatccagaaggcattgacggcgtacgcatgacctggaacgtctgg 234
Query: 61 ccagggagcaaagtcgaagccagcaaatgcgtaatccctctcgccgccacaatccccgtc 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ccacggagcaaagtcgaagccagcaaatgcgtaatccctctcgccgccacaatccccgtc 294
Query: 121 accatccctcaccactaccaccacgacatccccaccgtcccttacaccccactccgctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 accatccctcaccactaccaccacgacatccccaccgtcccttacaccccactccgctgc 354
Query: 181 aagtcatgctcctccctccttaaccccttctgcatcgtcgatttcaccgccaagatctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aagtcatgctcctccctccttaaccccttctgcatcgtcgatttcaccgccaagatctgg 414
Query: 241 atctgccccttctgcttctcccgcaataccttccctcctcactacgcccaaatctccccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 atctgccccttctgcttctcccgcaataccttccctcctcactacgcccaaatctccccc 474
Query: 301 accaatctccccgctgagctttacccccaatacaccaccctccaatacaccatccctaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 accaatctccccgctgagctttacccccaatacaccaccctccaatacaccatccctaac 534
Query: 361 cccaatcccaatccgcaaccccatgtcttcctcttcctcctcgacacctgcatcatccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cccaatcccaatccgcaaccccatgtcttcctcttcctcctcgacacctgcatcatccct 594
Query: 421 gaggagatggattacgtcaaatccgcgcttcaacgagccattggccttctccctgataat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gaggagatggattacgtcaaatccgcgcttcaacgagccattggccttctccctgataat 654
Query: 481 gctcttgtgggtttcatctcgtttgggacccaggttcaggttcacgagctcgcgttttcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gctcttgtgggtttcatctcgtttgggacccaggttcaggttcacgagctcgcgttttcc 714
Query: 541 gacatgtctaaggtttatgtcttccgcgggaacaaggagattacgaaggatcaggttttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gacatgtctaaggtttatgtcttccgcgggaacaaggagattacgaaggatcaggttttg 774
Query: 601 gagcagttgggccttggtggtagtggcgttgctaggcct 639
|||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gagcagttgggccttggtggtagtggcgttgctaggcct 813
>gnl|LJGI|FS322399 similar to UniRef100_A7QJV5 Cluster: Chromosome undetermined
scaffold_108, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (29%)
Length = 812
Score = 97.6 bits (49), Expect = 8e-20
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 192 ctccctccttaaccccttctgcatcgtcgatttcaccgccaagatctggatctgcccctt 251
|||| |||| |||||||||||||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 327 ctccatcctcaaccccttctgcatggtcgacttcgtcgccaagatctggatctgcccctt 386
Query: 252 ctgcttctcccgcaataccttccctcctcactacgcc 288
||||||| |||||| |||||| ||||||||||||
Sbjct: 387 ctgcttcaaccgcaaccacttcccccctcactacgcc 423
>gnl|LJGI|TC76285 similar to UniRef100_Q93ZN7 Cluster: At1g05520/T25N20_16; n=1;
Arabidopsis thaliana|Rep: At1g05520/T25N20_16 -
Arabidopsis thaliana (Mouse-ear cress), partial (15%)
Length = 533
Score = 87.7 bits (44), Expect = 8e-17
Identities = 161/200 (80%)
Strand = Plus / Plus
Query: 158 tcccttacaccccactccgctgcaagtcatgctcctccctccttaaccccttctgcatcg 217
|||| ||| |||| ||||||||||| | ||| ||||| ||| ||||||||| | ||
Sbjct: 238 tcccgtactcccctctccgctgcaaaacctgcacctccgccctcaaccccttcgcccgcg 297
Query: 218 tcgatttcaccgccaagatctggatctgccccttctgcttctcccgcaataccttccctc 277
|||| |||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 298 tcgacttcaccgccaagatctggatctgccccttctgctatcaacgcaaccatttccctc 357
Query: 278 ctcactacgcccaaatctcccccaccaatctccccgctgagctttacccccaatacacca 337
|||||||| | |||||| ||||||||||||| ||| || ||||| ||||||||||
Sbjct: 358 ctcactacaacgccatctccgagaccaatctccccggtgaactctaccctcaatacacca 417
Query: 338 ccctccaatacaccatccct 357
|| || |||||||| |||||
Sbjct: 418 ccgtcgaatacaccctccct 437
Score = 58.0 bits (29), Expect = 7e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 388 ttcctcttcctcctcgacacctgcatcatccctgaggagat 428
|||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 483 ttcctcttcctcctcgacacctgcctcatcgccgaggagat 523