Miyakogusa Predicted Gene

Lj4g3v2573940.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2573940.1 Non Chatacterized Hit- tr|I1K3P5|I1K3P5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.3,2e-38,Sm-like
ribonucleoproteins,Like-Sm (LSM) domain; snRNP Sm
proteins,Ribonucleoprotein LSM domain, euk,CUFF.51149.1
         (285 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70953 homologue to UniRef100_A7QWV4 Cluster: Chromoso...   248   2e-65

>gnl|LJGI|TC70953 homologue to UniRef100_A7QWV4 Cluster: Chromosome chr13
           scaffold_210, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_210, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (87%)
          Length = 654

 Score =  248 bits (125), Expect = 2e-65
 Identities = 224/257 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcaggcagaaaagaaacagttctggaccttgcaaagtttgtggacaaaggtgttcaa 60
           |||||||| || |||||||| ||||||||| | || || || || |||||||||||||||
Sbjct: 193 atgtcagggaggaaagaaacggttctggacttggccaaattcgttgacaaaggtgttcaa 252

                                                                       
Query: 61  gtgaagcttactggtggcagacaagtgacagggactctaaaaggctatgatcagttactt 120
           || ||||| ||||||||||||||||||||||| ||||| ||||| ||||| |||||||| 
Sbjct: 253 gttaagctcactggtggcagacaagtgacaggaactctgaaagggtatgaccagttacta 312

                                                                       
Query: 121 aaccttgtcctagatgaagccgtagagtttttaagagatcctgatgatcctctccaaatt 180
           ||||||||||| |||||||| || || ||| | ||||||||||||||||| ||  ||| |
Sbjct: 313 aaccttgtcctggatgaagctgttgaatttctgagagatcctgatgatccactgaaaact 372

                                                                       
Query: 181 actgatcagaccagacatcttggctttattgtttgtagaggaactgccgttatgcttgtt 240
           || | ||||||||||  ||||||||| |||||||||||||||||||| || |||||||||
Sbjct: 373 acagctcagaccagaagtcttggcttaattgtttgtagaggaactgctgtcatgcttgtt 432

                            
Query: 241 tccccaactgatggtac 257
           |||||||||||||||||
Sbjct: 433 tccccaactgatggtac 449