Miyakogusa Predicted Gene

Lj4g3v2573620.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2573620.1 tr|Q0J0I6|Q0J0I6_ORYSJ Os09g0507400 protein
OS=Oryza sativa subsp. japonica GN=Os09g0507400 PE=2
SV=,46.9,0.000000000000006,seg,NULL,CUFF.51128.1
         (399 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67514 similar to UniRef100_A7QP35 Cluster: Chromosome...    86   2e-16

>gnl|LJGI|TC67514 similar to UniRef100_A7QP35 Cluster: Chromosome chr1 scaffold_136,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_136, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (79%)
          Length = 1101

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                       
Query: 230 ctctgatgctgtgtggatcggttacgttcttccttgggttcatgctcatgccgtgggtta 289
           |||||||||| || || ||||||||||||||| | ||||||||||| |||||||||||| 
Sbjct: 513 ctctgatgctctgcgggtcggttacgttcttcatcgggttcatgctgatgccgtgggttc 572

                              
Query: 290 ttggattggtgatggtgtt 308
           | || ||||||||||||||
Sbjct: 573 tgggtttggtgatggtgtt 591