Miyakogusa Predicted Gene
- Lj4g3v2563550.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2563550.1 tr|A9RTM1|A9RTM1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_205447,66.18,4e-19,SUBFAMILY NOT NAMED,NULL; STRESS
ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN (SERP1/RAMP4),Endoplasmic
,CUFF.51123.1
(207 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW598654 homologue to UniRef100_A7QP46 Cluster: Chromos... 410 e-114
gnl|LJGI|TC71125 homologue to UniRef100_A7QP46 Cluster: Chromoso... 410 e-114
gnl|LJGI|BW597928 similar to UniRef100_A7QP46 Cluster: Chromosom... 355 7e-98
gnl|LJGI|BW599910 similar to UniRef100_A7QP46 Cluster: Chromosom... 111 2e-24
>gnl|LJGI|BW598654 homologue to UniRef100_A7QP46 Cluster: Chromosome chr1
scaffold_136, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_136, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (66%)
Length = 476
Score = 410 bits (207), Expect = e-114
Identities = 207/207 (100%)
Strand = Plus / Plus
Query: 1 atgacaacatcaaggcgccttgcagacaggaaggtggagaagtttgagaagaacatcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 atgacaacatcaaggcgccttgcagacaggaaggtggagaagtttgagaagaacatcaca 212
Query: 61 aagagaggatttgtgccagaaacaaccgctaagaaagggaaagactaccctgttggccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 aagagaggatttgtgccagaaacaaccgctaagaaagggaaagactaccctgttggccct 272
Query: 121 gtgctgctcggtttctttgtctttgttgtcattggatcatctctctttcagataatcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gtgctgctcggtttctttgtctttgttgtcattggatcatctctctttcagataatcagg 332
Query: 181 acagcaacgagtggaggcctggcttaa 207
|||||||||||||||||||||||||||
Sbjct: 333 acagcaacgagtggaggcctggcttaa 359
>gnl|LJGI|TC71125 homologue to UniRef100_A7QP46 Cluster: Chromosome chr1
scaffold_136, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_136, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (66%)
Length = 583
Score = 410 bits (207), Expect = e-114
Identities = 207/207 (100%)
Strand = Plus / Plus
Query: 1 atgacaacatcaaggcgccttgcagacaggaaggtggagaagtttgagaagaacatcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 atgacaacatcaaggcgccttgcagacaggaaggtggagaagtttgagaagaacatcaca 278
Query: 61 aagagaggatttgtgccagaaacaaccgctaagaaagggaaagactaccctgttggccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aagagaggatttgtgccagaaacaaccgctaagaaagggaaagactaccctgttggccct 338
Query: 121 gtgctgctcggtttctttgtctttgttgtcattggatcatctctctttcagataatcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gtgctgctcggtttctttgtctttgttgtcattggatcatctctctttcagataatcagg 398
Query: 181 acagcaacgagtggaggcctggcttaa 207
|||||||||||||||||||||||||||
Sbjct: 399 acagcaacgagtggaggcctggcttaa 425
>gnl|LJGI|BW597928 similar to UniRef100_A7QP46 Cluster: Chromosome chr1 scaffold_136,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_136, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 341
Score = 355 bits (179), Expect = 7e-98
Identities = 200/207 (96%)
Strand = Plus / Plus
Query: 1 atgacaacatcaaggcgccttgcagacaggaaggtggagaagtttgagaagaacatcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 atgacaacatcaaggcgccttgcagacaggaaggtggagaagtttgagaagaacatcaca 72
Query: 61 aagagaggatttgtgccagaaacaaccgctaagaaagggaaagactaccctgttggccct 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aatcctctctttgtgccagaaacaaccgctaagaaagggaaagactaccctgttggccct 132
Query: 121 gtgctgctcggtttctttgtctttgttgtcattggatcatctctctttcagataatcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gtgctgctcggtttctttgtctttgttgtcattggatcatctctctttcagataatcagg 192
Query: 181 acagcaacgagtggaggcctggcttaa 207
|||||||||||||||||||||||||||
Sbjct: 193 acagcaacgagtggaggcctggcttaa 219
>gnl|LJGI|BW599910 similar to UniRef100_A7QP46 Cluster: Chromosome chr1 scaffold_136,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_136, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 454
Score = 111 bits (56), Expect = 2e-24
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 104 actaccctgttggccctgtgctgctcggtttctttgtctttgttgtcattggatcatctc 163
||||||||| |||||||||||||||| || ||||||||||||||||||||||| | ||||
Sbjct: 223 actaccctggtggccctgtgctgctccgtgtctttgtctttgttgtcattggagcttctc 282
Query: 164 tctttcagataatcaggacagcaacgagtggaggcctggcttaa 207
|||||| || ||| ||| || |||||||||||||||||||||
Sbjct: 283 tctttcgtatgatcctgactgctacgagtggaggcctggcttaa 326