Miyakogusa Predicted Gene

Lj4g3v2551470.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2551470.1 Non Chatacterized Hit- tr|I1MYE7|I1MYE7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,74.83,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; A_thal_3515: uncharacterized
plant-specific domain,,CUFF.51117.1
         (835 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72979 similar to UniRef100_A7P9V1 Cluster: Chromosome...  1013   0.0  
gnl|LJGI|AV773323 similar to UniRef100_A7P9V1 Cluster: Chromosom...   317   6e-86

>gnl|LJGI|TC72979 similar to UniRef100_A7P9V1 Cluster: Chromosome chr14 scaffold_9,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_9, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (37%)
          Length = 559

 Score = 1013 bits (511), Expect = 0.0
 Identities = 511/511 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagaagcggtatcctctccctgagagacggtggttcctgggattggctatagtgggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49  atgaagaagcggtatcctctccctgagagacggtggttcctgggattggctatagtgggc 108

                                                                       
Query: 61  ttgataggagcggtgctgttcatagccaccgcgatcacagcctccgacagacggttcatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ttgataggagcggtgctgttcatagccaccgcgatcacagcctccgacagacggttcatg 168

                                                                       
Query: 121 tgccagctagcgccggggatcatcaagacacgaacccaaactggtgaggattacaaccca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tgccagctagcgccggggatcatcaagacacgaacccaaactggtgaggattacaaccca 228

                                                                       
Query: 181 acgccgatccagctgagggccatactccactacgccacctctcgcgtcacccctcaacaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 acgccgatccagctgagggccatactccactacgccacctctcgcgtcacccctcaacaa 288

                                                                       
Query: 241 tcagtgtcggagatcaagatcagcttcgacgtgctcaaatcaatgggccgacccagcaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tcagtgtcggagatcaagatcagcttcgacgtgctcaaatcaatgggccgacccagcaac 348

                                                                       
Query: 301 ttcctagtctttgggctgggccatgactccctcatgtgggcctcaatgaacccaggtggc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ttcctagtctttgggctgggccatgactccctcatgtgggcctcaatgaacccaggtggc 408

                                                                       
Query: 361 aacacgctgttcctggaggaggatcccaagtgggtccagaccgtcctcaaggacgagccg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aacacgctgttcctggaggaggatcccaagtgggtccagaccgtcctcaaggacgagccg 468

                                                                       
Query: 421 ggcctgcgagcccacaccgttcggtaccgcacccagcttcgggaagcccacgcgctactc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ggcctgcgagcccacaccgttcggtaccgcacccagcttcgggaagcccacgcgctactc 528

                                          
Query: 481 tcgtcgtcacggtccgagcccgcgtgctccc 511
           |||||||||||||||||||||||||||||||
Sbjct: 529 tcgtcgtcacggtccgagcccgcgtgctccc 559


>gnl|LJGI|AV773323 similar to UniRef100_A7P9V1 Cluster: Chromosome chr14 scaffold_9,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_9, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 490

 Score =  317 bits (160), Expect = 6e-86
 Identities = 173/176 (98%), Gaps = 1/176 (0%)
 Strand = Plus / Minus

                                                                       
Query: 552 cgcgctggagaatctacctgacgaggtgtatgagactgagtgggatctgatcatgatcga 611
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cgcgctggagaatctacctgacgaggtgtatgagactgagtgggatctgatcatgatcga 431

                                                                       
Query: 612 cgcgcctaaagggtattacgcggaggctcccggccgcatggctgccgtgttctcggccgc 671
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cgcgcctaaagggtattactcggaggctcccggccgcatggctgccgtgttctcggccgc 371

                                                                   
Query: 672 agtgatggcaaggaa-ccggaagggatccggtgtaacgcacgtgttcctacacgac 726
           ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 370 agtgatggcaaggaacccggaagggatccggtgtaacgcacgtgttcctacccgac 315



 Score =  198 bits (100), Expect = 4e-50
 Identities = 110/112 (98%), Gaps = 1/112 (0%)
 Strand = Plus / Minus

                                                                       
Query: 725 acgctggggagttcctttgcaagaagaa-cttggtgaagggagttggaaggctttggcat 783
           |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 289 acgctggggagttcctttgccagaagaaacttggtgaagggagttggaaggctttggcat 230

                                                               
Query: 784 ttccagataccaccatcctataaccgcaccgatgctaagagtttctgttaga 835
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ttccagataccaccatcctataaccgcaccgatgctaagagtttctgttaga 178