Miyakogusa Predicted Gene

Lj4g3v2539400.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2539400.1 Non Chatacterized Hit- tr|K4CIT3|K4CIT3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40,2e-18,TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT
ALPHA,NULL; TRANSLATION INITIATION FACTOR
EIF-2B,Initia,NODE_33481_length_478_cov_109.451881.path1.1
         (441 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61251 weakly similar to UniRef100_A7QIT5 Cluster: Chr...   844   0.0  

>gnl|LJGI|TC61251 weakly similar to UniRef100_A7QIT5 Cluster: Chromosome chr2
           scaffold_105, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr2 scaffold_105, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (29%)
          Length = 874

 Score =  844 bits (426), Expect = 0.0
 Identities = 439/442 (99%), Gaps = 1/442 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccaagatttttcctcaagaatccacatcctctgagtgcatcaattctgaaagagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  atggccaagatttttcctcaagaatccacatcctctgagtgcatcaattctgaaagagaa 155

                                                                       
Query: 61  acatatactctatggatgaaatcacttgttcttcactctaatggctgcactgtctatgat 120
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 acatttactctatggatgaaatcacttgttcttcactctaatggctgcactgtctatgat 215

                                                                       
Query: 121 tcaaatggtgacatcgtttaccgagttgataactatgacaggaagggcacaagagaagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tcaaatggtgacatcgtttaccgagttgataactatgacaggaagggcacaagagaagtt 275

                                                                       
Query: 181 aacctcatggatctaagaggcaaagttctctgcaccat-aaaaaagaggctactagctat 239
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 276 aacctcatggatctaagaggcaaagttctctgcaccataaaaaaagaggctactagctat 335

                                                                       
Query: 240 tggaagctgggaaggtcacagatattgcagcaattctagttatacaagccaggaacaacc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tggaagctgggaaggtcacagatattgcagcaattctagttatacaagccaggaacaacc 395

                                                                       
Query: 300 atggtttcaagttaaaagatgtaatacaggaaaagtagcttgccagatcaaagtggggtg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atggtttcaagttaaaagatgtaatacaggaaaagtagcttgccagatcaaagtggggtg 455

                                                                       
Query: 360 tcaaaagtactgcatagtaagaatcagtggcaaagcagcagcatttaagatagtaaccaa 419
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 456 tcaaaagtactgcatagtaagaatcagtggcaaagcagcagcgtttaagatagtaaccaa 515

                                 
Query: 420 agatggacacatagttgcagag 441
           ||||||||||||||||||||||
Sbjct: 516 agatggacacatagttgcagag 537