Miyakogusa Predicted Gene

Lj4g3v2538150.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2538150.1 Non Chatacterized Hit- tr|B9RMI9|B9RMI9_RICCO
ATP-dependent RNA helicase, putative OS=Ricinus
commun,76.88,0,ATP-DEPENDENT RNA HELICASE,NULL; P-loop containing
nucleoside triphosphate hydrolases,NULL; HELICASE,CUFF.51105.1
         (2097 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73788 similar to UniRef100_A7QBP6 Cluster: Chromosome...  1556   0.0  

>gnl|LJGI|TC73788 similar to UniRef100_A7QBP6 Cluster: Chromosome chr1 scaffold_75,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_75, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (32%)
          Length = 1072

 Score = 1556 bits (785), Expect = 0.0
 Identities = 791/793 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1305 ggcaaacaattatggttgcataactgaggctttgactgttgctgccatgttatcagctga 1364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ggcaaacaattatggttgcataactgaggctttgactgttgctgccatgttatcagctga 60

                                                                        
Query: 1365 aactgcattgctaccagggcagaggcagagcaagattgagaaaaagaggaaacatccaat 1424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aactgcattgctaccagggcagaggcagagcaagattgagaaaaagaggaaacatccaat 120

                                                                        
Query: 1425 gcctaaccttcctgatggttctggcttgggtgatcacattcaattgctgcagatatacga 1484
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gcctaaccttcctgatggttctggcttgggtgatcacattcaattgctgcagatatacga 180

                                                                        
Query: 1485 gtgttgggatcgaaatgattatgacattggttggtgcaaagacaatggcttgcaggtgcg 1544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gtgttgggatcgaaatgattatgacattggttggtgcaaagacaatggcttgcaggtgcg 240

                                                                        
Query: 1545 ggggatgttgtttgtcagagatgtccgtaagcagttatctcagataatgcagaaaatagc 1604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ggggatgttgtttgtcagagatgtccgtaagcagttatctcagataatgcagaaaatagc 300

                                                                        
Query: 1605 aaagggaccactggatataagggcacatgggaatggggatgagttccggcgggattatcg 1664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  aaagggaccactggatataagggcacatgggaatggggatgagttccggcgggattatcg 360

                                                                        
Query: 1665 aaatttgaggaaggctttatgtgtgggctatgcaaatcagctggctgaaagaaagatgca 1724
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  aaatttgaggaaggctttatgtgtgggctatgcaaatcagctggctgaaagaaagatgca 420

                                                                        
Query: 1725 tcataatggttatcgaactctaaatttccaagctcaagtagttcaggtgcatccatcatc 1784
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  tcataatggttatcgaactctaaatttccaagctcaagtagttcaggtgcatccatcatc 480

                                                                        
Query: 1785 tgtattgactgctgatgatctggggaagttcccagactatgttgtctaccatgagctagt 1844
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 481  tgtattgactgctgatgatctggggaagttcccagactatgttgtctaccttgagctagt 540

                                                                        
Query: 1845 tgctaccccaaaaccgtttatgagaaacgtctgtagtgttgacatgaggtggacaacaac 1904
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  tgctaccccaaaaccgtttatgagaaacgtctgtagtgttgacatgaggtggacaacaac 600

                                                                        
Query: 1905 tgttatgaacaagcttaagaccctagatgtgtacaaattaagtggtggtattaatcatgc 1964
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tgttatgaacaagcttaagaccctagatgtgtacaaattaagtggtggtattaatcatgc 660

                                                                        
Query: 1965 tgaggaggaatctgagaggagtctaccagatttgcccaagaaagatgtccaggttgctgg 2024
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  tgaggaggaatctgagaggagtctaccagatttgcccaagaaagatgtccaggttgctgg 720

                                                                        
Query: 2025 tgctgtcaatgactctgaaagtagaatccaagctgctcgagagcgatttcttgcgcgaaa 2084
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 721  tgctgtcaatgactctgaaagtagaatccaagctgctcgaaagcgatttcttgcgcgaaa 780

                         
Query: 2085 agccaataaatga 2097
            |||||||||||||
Sbjct: 781  agccaataaatga 793