Miyakogusa Predicted Gene

Lj4g3v2523910.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2523910.1 Non Chatacterized Hit- tr|B9G107|B9G107_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,34.5,9e-18,LEUCINE RICH REPEAT FAMILY PROTEIN,NULL;
F-BOX/LEUCINE RICH REPEAT PROTEIN,NULL; no
description,NULL,CUFF.51101.1
         (1512 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV406566 similar to UniRef100_Q8L720 Cluster: Expressed...   668   0.0  

>gnl|LJGI|AV406566 similar to UniRef100_Q8L720 Cluster: Expressed protein; n=1;
           Arabidopsis thaliana|Rep: Expressed protein -
           Arabidopsis thaliana (Mouse-ear cress), partial (11%)
          Length = 363

 Score =  668 bits (337), Expect = 0.0
 Identities = 353/361 (97%)
 Strand = Plus / Plus

                                                                       
Query: 112 gatagctttgggaaggtttggcctggtgttgagaatccctttgccagtgatagatgtaat 171
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   gatagctttgggaaggtttggcctggtgttgagaatccctttgccagtgatagatgtaat 62

                                                                       
Query: 172 aggggtcccaatgtcggtgccagtgccgcccaggattctgtttccaaggacattcttgat 231
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  aggggtcccaatgtcggtgccagtgccgcccaggattctgtttccaaggacattcttgat 122

                                                                       
Query: 232 attttgccctcggatccatttggcatggacatcagcactaccttcaccgggatggatatc 291
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 attttgccctcggatccatttggcatggacatcagcactaccttcaccgggatggatatc 182

                                                                       
Query: 292 ggtactaccttcacggccatcaccggatggcttgaggatttggagtttgattatggtgga 351
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ggtactaccttcacggccatcaccggatggcttgaggatttggagtttgattatggtgga 242

                                                                       
Query: 352 taccagagggatcagctcaggccgactgaacatagttaccagctgtttgccgagttgaan 411
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 243 taccagagggatcagctcaggccgactgaacatagttaccagctgtttgccgagttgaat 302

                                                                       
Query: 412 nnnnnnnggaacaatgctatgaggttccacggtttccctggcgggaacacaggtgttgag 471
                  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tttttttggaacaatgctatgaggttccacggtttccctggcgggaacacaggtgttgag 362

            
Query: 472 g 472
           |
Sbjct: 363 g 363