Miyakogusa Predicted Gene
- Lj4g3v2513900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2513900.1 Non Chatacterized Hit- tr|I1K3J0|I1K3J0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20253 PE,84.77,0,SIGNAL
RECOGNITION PARTICLE 72,NULL; SIGNAL RECOGNITION PARTICLE 72,Signal
recognition particle, SRP,CUFF.51088.1
(1992 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61163 similar to UniRef100_A7QBT9 Cluster: Chromosome... 1485 0.0
gnl|LJGI|TC77773 similar to UniRef100_A7QBT9 Cluster: Chromosome... 795 0.0
gnl|LJGI|BW609714 similar to UniRef100_A7QBT9 Cluster: Chromosom... 698 0.0
gnl|LJGI|TC69202 similar to UniRef100_A7QBT9 Cluster: Chromosome... 557 e-158
gnl|LJGI|TC74961 similar to UniRef100_A7QBT9 Cluster: Chromosome... 521 e-147
gnl|LJGI|AU089006 similar to UniRef100_A7QBT9 Cluster: Chromosom... 361 1e-98
>gnl|LJGI|TC61163 similar to UniRef100_A7QBT9 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 916
Score = 1485 bits (749), Expect = 0.0
Identities = 752/753 (99%)
Strand = Plus / Plus
Query: 1 atggctccgaaggccaaaccggcgccgtcgcagcctcccactcctcctccactcgaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 atggctccgaaggccaaaccggcgccgtcgcagcctcccactcctcctccactcgaagat 223
Query: 61 ctattcaccactctcagcaggcacatccagtcttccgcattcgatcatgcagccaaagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ctattcaccactctcagcaggcacatccagtcttccgcattcgatcatgcagccaaagtc 283
Query: 121 gcagatcagattctcgctgttgcgcccggcgacgaggacgcgatccgctgcaaggtcgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gcagatcagattctcgctgttgcgcccggcgacgaggacgcgatccgctgcaaggtcgtg 343
Query: 181 gctctgatcaaggttgaccgcgttgaagacgccctctctgccattcactcttcgaagact 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gctctgatcaagggtgaccgcgttgaagacgccctctctgccattcactcttcgaagact 403
Query: 241 ctgcctgatgattttcattaccttaaggcatactgcttatacagacaaaacaagttggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ctgcctgatgattttcattaccttaaggcatactgcttatacagacaaaacaagttggat 463
Query: 301 gaagctttggagtctttgagaaaacaagagagagatgatgaaactatgcttttggagtct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gaagctttggagtctttgagaaaacaagagagagatgatgaaactatgcttttggagtct 523
Query: 361 cagattttataccgtctggggaaaatggatgcttgcttagatatctaccagaagctacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cagattttataccgtctggggaaaatggatgcttgcttagatatctaccagaagctacaa 583
Query: 421 aagtccaagattgatagcttggaaataaattctgttgctgcctttgtcatggctgggagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aagtccaagattgatagcttggaaataaattctgttgctgcctttgtcatggctgggagg 643
Query: 481 tcatctgatgttcaaggattgctggattcacttcggcttaaagcaacaagcagctttgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tcatctgatgttcaaggattgctggattcacttcggcttaaagcaacaagcagctttgaa 703
Query: 541 ttggcttacaatactgcttgctctttgattgaaaggaagaagtatacggatgcagaacaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 ttggcttacaatactgcttgctctttgattgaaaggaagaagtatacggatgcagaacaa 763
Query: 601 ctcttgttgtccggtcgaagaattggtcaagaggtcctgatggaagataacttgcctgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 ctcttgttgtccggtcgaagaattggtcaagaggtcctgatggaagataacttgcctgat 823
Query: 661 gatgagatagaaattgaattgtctcctttagctgtacagttggcctatgtccgacagctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 gatgagatagaaattgaattgtctcctttagctgtacagttggcctatgtccgacagctt 883
Query: 721 ctcgggaataagcaagatgctattgaagcttat 753
|||||||||||||||||||||||||||||||||
Sbjct: 884 ctcgggaataagcaagatgctattgaagcttat 916
>gnl|LJGI|TC77773 similar to UniRef100_A7QBT9 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 401
Score = 795 bits (401), Expect = 0.0
Identities = 401/401 (100%)
Strand = Plus / Plus
Query: 970 ttgcttcttcatgccaataagcttgaccaggcccgagaacttgtttctgcattgccagac 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgcttcttcatgccaataagcttgaccaggcccgagaacttgtttctgcattgccagac 60
Query: 1030 atgtttccagatagtgtgataccggtattgctacaagctgcgctcttggttagagagaac 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgtttccagatagtgtgataccggtattgctacaagctgcgctcttggttagagagaac 120
Query: 1090 aaagctggaagggctgaggaaatactagcacagtttgccggtaagttccctgagaagtct 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaagctggaagggctgaggaaatactagcacagtttgccggtaagttccctgagaagtct 180
Query: 1150 aaggttgttcacttagccagggctcaggtggctgctgctgctggccacccacatattgca 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaggttgttcacttagccagggctcaggtggctgctgctgctggccacccacatattgca 240
Query: 1210 gccgattctcttgctaagatatcggatatccaacacatgcctgctactgttgctaccatg 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccgattctcttgctaagatatcggatatccaacacatgcctgctactgttgctaccatg 300
Query: 1270 gtgtctttaaaagagcgagctggtgacattgaaggtgcagcttctgtgcttgacgctgca 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgtctttaaaagagcgagctggtgacattgaaggtgcagcttctgtgcttgacgctgca 360
Query: 1330 acccaatggtggtccaatgctatgactgaggacaataagct 1370
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acccaatggtggtccaatgctatgactgaggacaataagct 401
>gnl|LJGI|BW609714 similar to UniRef100_A7QBT9 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 520
Score = 698 bits (352), Expect = 0.0
Identities = 355/356 (99%)
Strand = Plus / Plus
Query: 1 atggctccgaaggccaaaccggcgccgtcgcagcctcccactcctcctccactcgaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 atggctccgaaggccaaaccggcgccgtcgcagcctcccactcctcctccactcgaagat 224
Query: 61 ctattcaccactctcagcaggcacatccagtcttccgcattcgatcatgcagccaaagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ctattcaccactctcagcaggcacatccagtcttccgcattcgatcatgcagccaaagtc 284
Query: 121 gcagatcagattctcgctgttgcgcccggcgacgaggacgcgatccgctgcaaggtcgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gcagatcagattctcgctgttgcgcccggcgacgaggacgcgatccgctgcaaggtcgtg 344
Query: 181 gctctgatcaaggttgaccgcgttgaagacgccctctctgccattcactcttcgaagact 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gctctgatcaagggtgaccgcgttgaagacgccctctctgccattcactcttcgaagact 404
Query: 241 ctgcctgatgattttcattaccttaaggcatactgcttatacagacaaaacaagttggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctgcctgatgattttcattaccttaaggcatactgcttatacagacaaaacaagttggat 464
Query: 301 gaagctttggagtctttgagaaaacaagagagagatgatgaaactatgcttttgga 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gaagctttggagtctttgagaaaacaagagagagatgatgaaactatgcttttgga 520
>gnl|LJGI|TC69202 similar to UniRef100_A7QBT9 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 828
Score = 557 bits (281), Expect = e-158
Identities = 281/281 (100%)
Strand = Plus / Plus
Query: 1712 ggttcgaccctgcaaacccaggtcctccaccagacccagaaaggtggcttccgaagcggg 1771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ggttcgaccctgcaaacccaggtcctccaccagacccagaaaggtggcttccgaagcggg 288
Query: 1772 agagatcaactttcaggcccaagaggaaggacaaaagagctgctcaagtgagaggctctc 1831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 agagatcaactttcaggcccaagaggaaggacaaaagagctgctcaagtgagaggctctc 348
Query: 1832 agggtgctgtagctaaagaaaagcatgatgccggttcctcgtccaatcattcaaatccaa 1891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 agggtgctgtagctaaagaaaagcatgatgccggttcctcgtccaatcattcaaatccaa 408
Query: 1892 aatcaaaccagtctacttcctccaaaggagttgcacagaatgcagtttctgagcaagcca 1951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aatcaaaccagtctacttcctccaaaggagttgcacagaatgcagtttctgagcaagcca 468
Query: 1952 agccctcatccaagtcaagaaagaagtctagaaattaacta 1992
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 agccctcatccaagtcaagaaagaagtctagaaattaacta 509
Score = 331 bits (167), Expect = 1e-89
Identities = 167/167 (100%)
Strand = Plus / Plus
Query: 1484 ttgggctgataacaacagttgcgcgcgcagatgttgttaaggcagagctatatgaaaagc 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgggctgataacaacagttgcgcgcgcagatgttgttaaggcagagctatatgaaaagc 60
Query: 1544 aactaaagaccttagctggttcgaagggaattgatgtggacagcttggagcgtacttctg 1603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aactaaagaccttagctggttcgaagggaattgatgtggacagcttggagcgtacttctg 120
Query: 1604 gagtgaaacaagttgcaggtccggttgatgttactgaaacctatgag 1650
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagtgaaacaagttgcaggtccggttgatgttactgaaacctatgag 167
>gnl|LJGI|TC74961 similar to UniRef100_A7QBT9 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 528
Score = 521 bits (263), Expect = e-147
Identities = 266/267 (99%)
Strand = Plus / Plus
Query: 1 atggctccgaaggccaaaccggcgccgtcgcagcctcccactcctcctccactcgaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 atggctccgaaggccaaaccggcgccgtcgcagcctcccactcctcctccactcgaagat 280
Query: 61 ctattcaccactctcagcaggcacatccagtcttccgcattcgatcatgcagccaaagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ctattcaccactctcagcaggcacatccagtcttccgcattcgatcatgcagccaaagtc 340
Query: 121 gcagatcagattctcgctgttgcgcccggcgacgaggacgcgatccgctgcaaggtcgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gcagatcagattctcgctgttgcgcccggcgacgaggacgcgatccgctgcaaggtcgtg 400
Query: 181 gctctgatcaaggttgaccgcgttgaagacgccctctctgccattcactcttcgaagact 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gctctgatcaagggtgaccgcgttgaagacgccctctctgccattcactcttcgaagact 460
Query: 241 ctgcctgatgattttcattaccttaag 267
|||||||||||||||||||||||||||
Sbjct: 461 ctgcctgatgattttcattaccttaag 487
>gnl|LJGI|AU089006 similar to UniRef100_A7QBT9 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 213
Score = 361 bits (182), Expect = 1e-98
Identities = 203/212 (95%)
Strand = Plus / Plus
Query: 1232 cggatatccaacacatgcctgctactgttgctaccatggtgtctttaaaagagcgagctg 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cggatatccaacacatgcctgctactgttgctaccatggtgtctttaaaagagcgagctg 61
Query: 1292 gtgacattgaaggtgcagcttctgtgcttgacgctgcaacccaatggtggtccaatgcta 1351
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 62 gtgacattgaaggtgcagcttctgtgcttgacgctgcancccaatggtggtccaatgcta 121
Query: 1352 tgactgaggacaataagcttaatgttataatgcaagaggctgcttcattcaagctcagac 1411
||| |||||||||||| |||||||||||||||||| ||||||||||||||| |||| ||
Sbjct: 122 tgantgaggacaataancttaatgttataatgcaanaggctgcttcattcantctcatac 181
Query: 1412 atggcaaggaagagggtgctgctaaactctat 1443
|||||||||| ||||||||||||||||||||
Sbjct: 182 ntggcaaggaacagggtgctgctaaactctat 213