Miyakogusa Predicted Gene

Lj4g3v2513900.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2513900.1 Non Chatacterized Hit- tr|I1K3J0|I1K3J0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20253 PE,84.77,0,SIGNAL
RECOGNITION PARTICLE 72,NULL; SIGNAL RECOGNITION PARTICLE 72,Signal
recognition particle, SRP,CUFF.51088.1
         (1992 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61163 similar to UniRef100_A7QBT9 Cluster: Chromosome...  1485   0.0  
gnl|LJGI|TC77773 similar to UniRef100_A7QBT9 Cluster: Chromosome...   795   0.0  
gnl|LJGI|BW609714 similar to UniRef100_A7QBT9 Cluster: Chromosom...   698   0.0  
gnl|LJGI|TC69202 similar to UniRef100_A7QBT9 Cluster: Chromosome...   557   e-158
gnl|LJGI|TC74961 similar to UniRef100_A7QBT9 Cluster: Chromosome...   521   e-147
gnl|LJGI|AU089006 similar to UniRef100_A7QBT9 Cluster: Chromosom...   361   1e-98

>gnl|LJGI|TC61163 similar to UniRef100_A7QBT9 Cluster: Chromosome chr1 scaffold_75,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_75, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (35%)
          Length = 916

 Score = 1485 bits (749), Expect = 0.0
 Identities = 752/753 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctccgaaggccaaaccggcgccgtcgcagcctcccactcctcctccactcgaagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 atggctccgaaggccaaaccggcgccgtcgcagcctcccactcctcctccactcgaagat 223

                                                                       
Query: 61  ctattcaccactctcagcaggcacatccagtcttccgcattcgatcatgcagccaaagtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ctattcaccactctcagcaggcacatccagtcttccgcattcgatcatgcagccaaagtc 283

                                                                       
Query: 121 gcagatcagattctcgctgttgcgcccggcgacgaggacgcgatccgctgcaaggtcgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gcagatcagattctcgctgttgcgcccggcgacgaggacgcgatccgctgcaaggtcgtg 343

                                                                       
Query: 181 gctctgatcaaggttgaccgcgttgaagacgccctctctgccattcactcttcgaagact 240
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gctctgatcaagggtgaccgcgttgaagacgccctctctgccattcactcttcgaagact 403

                                                                       
Query: 241 ctgcctgatgattttcattaccttaaggcatactgcttatacagacaaaacaagttggat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ctgcctgatgattttcattaccttaaggcatactgcttatacagacaaaacaagttggat 463

                                                                       
Query: 301 gaagctttggagtctttgagaaaacaagagagagatgatgaaactatgcttttggagtct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gaagctttggagtctttgagaaaacaagagagagatgatgaaactatgcttttggagtct 523

                                                                       
Query: 361 cagattttataccgtctggggaaaatggatgcttgcttagatatctaccagaagctacaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cagattttataccgtctggggaaaatggatgcttgcttagatatctaccagaagctacaa 583

                                                                       
Query: 421 aagtccaagattgatagcttggaaataaattctgttgctgcctttgtcatggctgggagg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aagtccaagattgatagcttggaaataaattctgttgctgcctttgtcatggctgggagg 643

                                                                       
Query: 481 tcatctgatgttcaaggattgctggattcacttcggcttaaagcaacaagcagctttgaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tcatctgatgttcaaggattgctggattcacttcggcttaaagcaacaagcagctttgaa 703

                                                                       
Query: 541 ttggcttacaatactgcttgctctttgattgaaaggaagaagtatacggatgcagaacaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 ttggcttacaatactgcttgctctttgattgaaaggaagaagtatacggatgcagaacaa 763

                                                                       
Query: 601 ctcttgttgtccggtcgaagaattggtcaagaggtcctgatggaagataacttgcctgat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 ctcttgttgtccggtcgaagaattggtcaagaggtcctgatggaagataacttgcctgat 823

                                                                       
Query: 661 gatgagatagaaattgaattgtctcctttagctgtacagttggcctatgtccgacagctt 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 gatgagatagaaattgaattgtctcctttagctgtacagttggcctatgtccgacagctt 883

                                            
Query: 721 ctcgggaataagcaagatgctattgaagcttat 753
           |||||||||||||||||||||||||||||||||
Sbjct: 884 ctcgggaataagcaagatgctattgaagcttat 916


>gnl|LJGI|TC77773 similar to UniRef100_A7QBT9 Cluster: Chromosome chr1 scaffold_75,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_75, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (20%)
          Length = 401

 Score =  795 bits (401), Expect = 0.0
 Identities = 401/401 (100%)
 Strand = Plus / Plus

                                                                        
Query: 970  ttgcttcttcatgccaataagcttgaccaggcccgagaacttgtttctgcattgccagac 1029
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ttgcttcttcatgccaataagcttgaccaggcccgagaacttgtttctgcattgccagac 60

                                                                        
Query: 1030 atgtttccagatagtgtgataccggtattgctacaagctgcgctcttggttagagagaac 1089
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   atgtttccagatagtgtgataccggtattgctacaagctgcgctcttggttagagagaac 120

                                                                        
Query: 1090 aaagctggaagggctgaggaaatactagcacagtttgccggtaagttccctgagaagtct 1149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  aaagctggaagggctgaggaaatactagcacagtttgccggtaagttccctgagaagtct 180

                                                                        
Query: 1150 aaggttgttcacttagccagggctcaggtggctgctgctgctggccacccacatattgca 1209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  aaggttgttcacttagccagggctcaggtggctgctgctgctggccacccacatattgca 240

                                                                        
Query: 1210 gccgattctcttgctaagatatcggatatccaacacatgcctgctactgttgctaccatg 1269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gccgattctcttgctaagatatcggatatccaacacatgcctgctactgttgctaccatg 300

                                                                        
Query: 1270 gtgtctttaaaagagcgagctggtgacattgaaggtgcagcttctgtgcttgacgctgca 1329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gtgtctttaaaagagcgagctggtgacattgaaggtgcagcttctgtgcttgacgctgca 360

                                                     
Query: 1330 acccaatggtggtccaatgctatgactgaggacaataagct 1370
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  acccaatggtggtccaatgctatgactgaggacaataagct 401


>gnl|LJGI|BW609714 similar to UniRef100_A7QBT9 Cluster: Chromosome chr1 scaffold_75,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_75, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 520

 Score =  698 bits (352), Expect = 0.0
 Identities = 355/356 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctccgaaggccaaaccggcgccgtcgcagcctcccactcctcctccactcgaagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 atggctccgaaggccaaaccggcgccgtcgcagcctcccactcctcctccactcgaagat 224

                                                                       
Query: 61  ctattcaccactctcagcaggcacatccagtcttccgcattcgatcatgcagccaaagtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ctattcaccactctcagcaggcacatccagtcttccgcattcgatcatgcagccaaagtc 284

                                                                       
Query: 121 gcagatcagattctcgctgttgcgcccggcgacgaggacgcgatccgctgcaaggtcgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gcagatcagattctcgctgttgcgcccggcgacgaggacgcgatccgctgcaaggtcgtg 344

                                                                       
Query: 181 gctctgatcaaggttgaccgcgttgaagacgccctctctgccattcactcttcgaagact 240
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gctctgatcaagggtgaccgcgttgaagacgccctctctgccattcactcttcgaagact 404

                                                                       
Query: 241 ctgcctgatgattttcattaccttaaggcatactgcttatacagacaaaacaagttggat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctgcctgatgattttcattaccttaaggcatactgcttatacagacaaaacaagttggat 464

                                                                   
Query: 301 gaagctttggagtctttgagaaaacaagagagagatgatgaaactatgcttttgga 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gaagctttggagtctttgagaaaacaagagagagatgatgaaactatgcttttgga 520


>gnl|LJGI|TC69202 similar to UniRef100_A7QBT9 Cluster: Chromosome chr1 scaffold_75,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_75, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (23%)
          Length = 828

 Score =  557 bits (281), Expect = e-158
 Identities = 281/281 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1712 ggttcgaccctgcaaacccaggtcctccaccagacccagaaaggtggcttccgaagcggg 1771
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229  ggttcgaccctgcaaacccaggtcctccaccagacccagaaaggtggcttccgaagcggg 288

                                                                        
Query: 1772 agagatcaactttcaggcccaagaggaaggacaaaagagctgctcaagtgagaggctctc 1831
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289  agagatcaactttcaggcccaagaggaaggacaaaagagctgctcaagtgagaggctctc 348

                                                                        
Query: 1832 agggtgctgtagctaaagaaaagcatgatgccggttcctcgtccaatcattcaaatccaa 1891
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349  agggtgctgtagctaaagaaaagcatgatgccggttcctcgtccaatcattcaaatccaa 408

                                                                        
Query: 1892 aatcaaaccagtctacttcctccaaaggagttgcacagaatgcagtttctgagcaagcca 1951
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409  aatcaaaccagtctacttcctccaaaggagttgcacagaatgcagtttctgagcaagcca 468

                                                     
Query: 1952 agccctcatccaagtcaagaaagaagtctagaaattaacta 1992
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 469  agccctcatccaagtcaagaaagaagtctagaaattaacta 509



 Score =  331 bits (167), Expect = 1e-89
 Identities = 167/167 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1484 ttgggctgataacaacagttgcgcgcgcagatgttgttaaggcagagctatatgaaaagc 1543
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ttgggctgataacaacagttgcgcgcgcagatgttgttaaggcagagctatatgaaaagc 60

                                                                        
Query: 1544 aactaaagaccttagctggttcgaagggaattgatgtggacagcttggagcgtacttctg 1603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aactaaagaccttagctggttcgaagggaattgatgtggacagcttggagcgtacttctg 120

                                                           
Query: 1604 gagtgaaacaagttgcaggtccggttgatgttactgaaacctatgag 1650
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gagtgaaacaagttgcaggtccggttgatgttactgaaacctatgag 167


>gnl|LJGI|TC74961 similar to UniRef100_A7QBT9 Cluster: Chromosome chr1 scaffold_75,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_75, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 528

 Score =  521 bits (263), Expect = e-147
 Identities = 266/267 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctccgaaggccaaaccggcgccgtcgcagcctcccactcctcctccactcgaagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 atggctccgaaggccaaaccggcgccgtcgcagcctcccactcctcctccactcgaagat 280

                                                                       
Query: 61  ctattcaccactctcagcaggcacatccagtcttccgcattcgatcatgcagccaaagtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ctattcaccactctcagcaggcacatccagtcttccgcattcgatcatgcagccaaagtc 340

                                                                       
Query: 121 gcagatcagattctcgctgttgcgcccggcgacgaggacgcgatccgctgcaaggtcgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gcagatcagattctcgctgttgcgcccggcgacgaggacgcgatccgctgcaaggtcgtg 400

                                                                       
Query: 181 gctctgatcaaggttgaccgcgttgaagacgccctctctgccattcactcttcgaagact 240
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gctctgatcaagggtgaccgcgttgaagacgccctctctgccattcactcttcgaagact 460

                                      
Query: 241 ctgcctgatgattttcattaccttaag 267
           |||||||||||||||||||||||||||
Sbjct: 461 ctgcctgatgattttcattaccttaag 487


>gnl|LJGI|AU089006 similar to UniRef100_A7QBT9 Cluster: Chromosome chr1 scaffold_75,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_75, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (11%)
          Length = 213

 Score =  361 bits (182), Expect = 1e-98
 Identities = 203/212 (95%)
 Strand = Plus / Plus

                                                                        
Query: 1232 cggatatccaacacatgcctgctactgttgctaccatggtgtctttaaaagagcgagctg 1291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    cggatatccaacacatgcctgctactgttgctaccatggtgtctttaaaagagcgagctg 61

                                                                        
Query: 1292 gtgacattgaaggtgcagcttctgtgcttgacgctgcaacccaatggtggtccaatgcta 1351
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 62   gtgacattgaaggtgcagcttctgtgcttgacgctgcancccaatggtggtccaatgcta 121

                                                                        
Query: 1352 tgactgaggacaataagcttaatgttataatgcaagaggctgcttcattcaagctcagac 1411
            ||| |||||||||||| |||||||||||||||||| |||||||||||||||  |||| ||
Sbjct: 122  tgantgaggacaataancttaatgttataatgcaanaggctgcttcattcantctcatac 181

                                            
Query: 1412 atggcaaggaagagggtgctgctaaactctat 1443
             |||||||||| ||||||||||||||||||||
Sbjct: 182  ntggcaaggaacagggtgctgctaaactctat 213