Miyakogusa Predicted Gene

Lj4g3v2513890.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2513890.1 Non Chatacterized Hit- tr|I1LNC5|I1LNC5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42603
PE,75.95,0,seg,NULL; SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A)
REGULATORY SUBUNIT B,NULL; SERINE/THREONINE,CUFF.51080.1
         (1212 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59277 similar to UniRef100_A7PLV2 Cluster: Chromosome...   167   2e-40
gnl|LJGI|TC60043 similar to UniRef100_A7PLV2 Cluster: Chromosome...   135   7e-31
gnl|LJGI|TC68584 similar to UniRef100_A7PHZ0 Cluster: Chromosome...    74   2e-12
gnl|LJGI|TC65845 similar to UniRef100_Q8RW96 Cluster: Serine/thr...    60   3e-08

>gnl|LJGI|TC59277 similar to UniRef100_A7PLV2 Cluster: Chromosome chr14 scaffold_21,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_21, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (32%)
          Length = 760

 Score =  167 bits (84), Expect = 2e-40
 Identities = 162/188 (86%)
 Strand = Plus / Plus

                                                                        
Query: 985  aagcttgctgataccatcattaggggattgttgaagtactggcctataaccaatagttcg 1044
            |||||||| |||||||| |||||||| || |||||||||||||| ||||| ||||||   
Sbjct: 1    aagcttgcagataccattattagggggttattgaagtactggccaataacaaatagtata 60

                                                                        
Query: 1045 aaggaagtcatgtttttgggtgagttggaagaagtattagaagcaactcaacctccagaa 1104
            ||||||||||||||  ||||||||||||||||||| ||||||||||||||||| ||||| 
Sbjct: 61   aaggaagtcatgttcctgggtgagttggaagaagtcttagaagcaactcaaccaccagag 120

                                                                        
Query: 1105 ttccagcgttgtatggtgccattgtttcgacgaattgcccattgtttgaacagtccacat 1164
            || |||||||| |||||||| || ||||| ||  |||||| ||||||||| || || |||
Sbjct: 121  tttcagcgttgcatggtgccgttatttcgccgtgttgcccgttgtttgaatagcccccat 180

                    
Query: 1165 tttcaggt 1172
            || |||||
Sbjct: 181  ttccaggt 188


>gnl|LJGI|TC60043 similar to UniRef100_A7PLV2 Cluster: Chromosome chr14 scaffold_21,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_21, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 859

 Score =  135 bits (68), Expect = 7e-31
 Identities = 122/140 (87%)
 Strand = Plus / Plus

                                                                       
Query: 217 gaagcgttgcctgcattcaaggatgttcctaattcggagaagccgattttgtttgtgaag 276
           ||||| ||||||||||| | ||||||||||| ||| ||||| ||||  |||||||| |||
Sbjct: 601 gaagctttgcctgcatttagggatgttcctagttctgagaaaccgagcttgtttgttaag 660

                                                                       
Query: 277 aagctgaggatgtgtagtgttgtgtttgacttcactgaccctgccaagcacctcagagaa 336
           ||||| | |||||||||||| |||||||||||||||||||| |||||||| || | ||||
Sbjct: 661 aagctcaagatgtgtagtgtggtgtttgacttcactgaccccgccaagcatctaaaagaa 720

                               
Query: 337 aaggaggttaagagacaggc 356
           |||||| ||||| |||||||
Sbjct: 721 aaggagattaagcgacaggc 740


>gnl|LJGI|TC68584 similar to UniRef100_A7PHZ0 Cluster: Chromosome chr13 scaffold_17,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr13 scaffold_17, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (81%)
          Length = 2025

 Score = 73.8 bits (37), Expect = 2e-12
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                        
Query: 933  gtaccatcagcaactgtcttattgcatcacccaatttgtagagaaagattgcaagcttgc 992
            |||||| |||||  |||| || |||||||| || ||||| |||||||||| |||||| ||
Sbjct: 1159 gtaccaccagcagttgtcatactgcatcactcagtttgtggagaaagatttcaagctcgc 1218

                                                 
Query: 993  tgataccatcattaggggattgttgaagtactggcct 1029
             |||||  | |||||||||||||||||||| ||||||
Sbjct: 1219 ggatacggttattaggggattgttgaagtattggcct 1255


>gnl|LJGI|TC65845 similar to UniRef100_Q8RW96 Cluster: Serine/threonine protein
            phosphatase 2A 59 kDa regulatory subunit B' gamma
            isoform; n=2; Arabidopsis thaliana|Rep: Serine/threonine
            protein phosphatase 2A 59 kDa regulatory subunit B' gamma
            isoform - Arabidopsis thaliana (Mouse-ear cress), partial
            (43%)
          Length = 1141

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1036 aatagttcgaaggaagtcatgtttttgggtgagttggaagaagtattagaagcaactcaa 1095
            |||||||| ||||| || |||||  | |||||  |||| ||||| |||||||| ||||| 
Sbjct: 193  aatagttcaaaggaggtaatgttccttggtgaactggaggaagttttagaagccactcag 252

                                                  
Query: 1096 cctccagaattccagcgttgtatggtgccattgtttcg 1133
            ||  ||||||| ||||| ||| ||||||||||||||||
Sbjct: 253  cccgcagaatttcagcgatgtgtggtgccattgtttcg 290