Miyakogusa Predicted Gene
- Lj4g3v2500600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2500600.1 tr|A9REY4|A9REY4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65234
,30.3,2e-18,Remorin_C,Remorin, C-terminal; coiled-coil,NULL; seg,NULL;
FAMILY NOT NAMED,NULL,CUFF.51064.1
(1620 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58361 similar to UniRef100_A7Q185 Cluster: Chromosome... 1752 0.0
gnl|LJGI|TC70833 similar to UniRef100_A7Q185 Cluster: Chromosome... 1057 0.0
gnl|LJGI|BW630007 similar to UniRef100_A7Q185 Cluster: Chromosom... 416 e-115
>gnl|LJGI|TC58361 similar to UniRef100_A7Q185 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 1136
Score = 1752 bits (884), Expect = 0.0
Identities = 884/884 (100%)
Strand = Plus / Plus
Query: 1 atggagtacgagagaatacagaaagttcaggctggaataatttctcccagtaaactaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atggagtacgagagaatacagaaagttcaggctggaataatttctcccagtaaactaagg 274
Query: 61 atgaagttgttggggcctaggaagaaggatggatccaacagtaactcatccagaacttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 atgaagttgttggggcctaggaagaaggatggatccaacagtaactcatccagaacttcc 334
Query: 121 ccttcaagaattgaggatgctgaatttgtgaatagcttactttcctcaaacagtgacaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ccttcaagaattgaggatgctgaatttgtgaatagcttactttcctcaaacagtgacaac 394
Query: 181 cttgatgatgaagttacatctccaagcttagaagtcctatcattaaagccatcaagtgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cttgatgatgaagttacatctccaagcttagaagtcctatcattaaagccatcaagtgat 454
Query: 241 gcagtactgaatcagagacagagtgaccatacttctcatgaaccaaaggagacaatgcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gcagtactgaatcagagacagagtgaccatacttctcatgaaccaaaggagacaatgcct 514
Query: 301 agggaaaatggtgacacagtacgcgtaaaaacgcagcattttcataagcttgacactgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 agggaaaatggtgacacagtacgcgtaaaaacgcagcattttcataagcttgacactgga 574
Query: 361 agttcaagcgcaattcacccgatgagaacaacagaagatgagaatcttgactatgacagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 agttcaagcgcaattcacccgatgagaacaacagaagatgagaatcttgactatgacagc 634
Query: 421 aatgctagctcatcaagtttcgaatttgataaaggagagagaccagtgagcaatcctgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aatgctagctcatcaagtttcgaatttgataaaggagagagaccagtgagcaatcctgca 694
Query: 481 acaagatcccgattgagaccaattccttctaagtggaatgatgcggaaaaatggatcatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 acaagatcccgattgagaccaattccttctaagtggaatgatgcggaaaaatggatcatg 754
Query: 541 aacaggcaaaatacacaagcaagttactcgaaaaagaatatcaatgtacatggcctagcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 aacaggcaaaatacacaagcaagttactcgaaaaagaatatcaatgtacatggcctagcg 814
Query: 601 aatcgcttgcaagcgagtatggtgagggttgctcccgagtctggtaattatgatcataag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 aatcgcttgcaagcgagtatggtgagggttgctcccgagtctggtaattatgatcataag 874
Query: 661 ctcccagcaaccaaggtgacggaaacaaagcgagtcgatttctgtcaaccagcatcgcac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 ctcccagcaaccaaggtgacggaaacaaagcgagtcgatttctgtcaaccagcatcgcac 934
Query: 721 gcgggatttgagaaattctcttttgttccatctgatgctcattcagtttcaggtcaagca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 gcgggatttgagaaattctcttttgttccatctgatgctcattcagtttcaggtcaagca 994
Query: 781 catggaagaatcccagtggcagagtcttttccccaaagcaaagatttaaaggaagtaaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 catggaagaatcccagtggcagagtcttttccccaaagcaaagatttaaaggaagtaaat 1054
Query: 841 gatttaggtttatcttgctcaagtagtacagagaatgagacagg 884
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 gatttaggtttatcttgctcaagtagtacagagaatgagacagg 1098
>gnl|LJGI|TC70833 similar to UniRef100_A7Q185 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 902
Score = 1057 bits (533), Expect = 0.0
Identities = 536/537 (99%)
Strand = Plus / Plus
Query: 1084 cagtttccagctgtaaaaagcaataaacatttgtctgaagaggaaatgaagctcaagaca 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagtttccagctgtaaaaagcaataaacatttgtctgaagaggaaatgaagctcaagaca 60
Query: 1144 aggagggagattgcagccctcggcgtgcggcttggtaagatgaacattgctgcatgggca 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggagggagattgcagccctcggcgtgcggcttggtaagatgaacattgctgcatgggca 120
Query: 1204 agcaaagatgatcaggaaaataaaaaaccttctgcagccgaaacaaatgcccgggaacag 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcaaagatgatcaggaaaataaaaaaccttctgcagccgaaacaaatgcccgggaacag 180
Query: 1264 gagcgaattgaaattgaaaaacgtgccgcattgtgggaggaagctgaaaaatctagacat 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagcgaattgaaattgaaaaacgtgccgcattgtgggaggaagctgaaaaatctagacat 240
Query: 1324 actgcaagatttaagcgtgaggaaatcaaaattcaagcatgggaaagtcaggaaaaggca 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 actgcaagatttaagcgtgaggaaatcaaaattcaagcatgggaaagtcaggaaaaggca 300
Query: 1384 aaattagaagcagaaatgagaagaactgaggccaaagttgagcaaatgagagcccagaca 1443
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaattagaagcagaaatgagaggaactgaggccaaagttgagcaaatgagagcccagaca 360
Query: 1444 catgcaaaaatggtgaaaaagattgctatggcaaggcaaagatcagaagaaaaacgtgcg 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catgcaaaaatggtgaaaaagattgctatggcaaggcaaagatcagaagaaaaacgtgcg 420
Query: 1504 gcagccgaagctagaaaaaatcgagaagcagaaaggactgcagctcaagcagaatacata 1563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcagccgaagctagaaaaaatcgagaagcagaaaggactgcagctcaagcagaatacata 480
Query: 1564 cgccaaacaggaaaattgccatcttacactcacatttgttgtggttggctgtgatat 1620
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgccaaacaggaaaattgccatcttacactcacatttgttgtggttggctgtgatat 537
>gnl|LJGI|BW630007 similar to UniRef100_A7Q185 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 476
Score = 416 bits (210), Expect = e-115
Identities = 210/210 (100%)
Strand = Plus / Plus
Query: 1 atggagtacgagagaatacagaaagttcaggctggaataatttctcccagtaaactaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atggagtacgagagaatacagaaagttcaggctggaataatttctcccagtaaactaagg 326
Query: 61 atgaagttgttggggcctaggaagaaggatggatccaacagtaactcatccagaacttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atgaagttgttggggcctaggaagaaggatggatccaacagtaactcatccagaacttcc 386
Query: 121 ccttcaagaattgaggatgctgaatttgtgaatagcttactttcctcaaacagtgacaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ccttcaagaattgaggatgctgaatttgtgaatagcttactttcctcaaacagtgacaac 446
Query: 181 cttgatgatgaagttacatctccaagctta 210
||||||||||||||||||||||||||||||
Sbjct: 447 cttgatgatgaagttacatctccaagctta 476