Miyakogusa Predicted Gene
- Lj4g3v2468440.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2468440.3 Non Chatacterized Hit- tr|F6HLT7|F6HLT7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,56.47,0,TCP,Transcription factor, TCP; seg,NULL; TCP,Transcription
factor TCP subgroup; R,CYC/TB1, R domain;,CUFF.51108.3
(1447 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66739 homologue to UniRef100_A7Q165 Cluster: Chromoso... 1372 0.0
gnl|LJGI|AV416048 homologue to UniRef100_A7Q165 Cluster: Chromos... 807 0.0
gnl|LJGI|TC80005 similar to UniRef100_Q0D8K4 Cluster: Os07g01520... 159 6e-38
gnl|LJGI|TC81016 similar to UniRef100_A7Q165 Cluster: Chromosome... 70 4e-11
>gnl|LJGI|TC66739 homologue to UniRef100_A7Q165 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 1229
Score = 1372 bits (692), Expect = 0.0
Identities = 735/755 (97%)
Strand = Plus / Plus
Query: 693 tgattcacacattgctcagcaccaccaacaccaccaacaacacaacaatgtgaaccccat 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tgattcacacattgctcagcaccaccaacaccaccaacaacacaacaatgtgaaccccat 250
Query: 753 ttctcaaacagcttctttcactgagctgctaacaggtggaatcagcagtgcagttcccac 812
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 251 ttctcaaacagcttctttcactgagctgctaacaggtggaatcagcagtgcaattcccac 310
Query: 813 aacaacagggccagttcatcagaacaacaaccagcaatggtgttcttcttcatcagcagc 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aacaacagggccagttcatcagaacaacaaccagcaatggtgttcttcttcatcagcagc 370
Query: 873 accaatggattacttcacttcagggcttcttggtcctccttcttccacttcaagaaccca 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 accaatggattacttcacttcagggcttcttggtcctccttcttccacttcaagaaccca 430
Query: 933 acaccatcatcaccaacaacattcttcagggttctcaatctcaaatatccaattggggca 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 acaccatcatcaccaacaacattcttcagggttctcaatctcaaatatccaattggggca 490
Query: 993 ctcacattcccttgctgaagccatgtcagtttcactaccattcaatggtgaaaaccattc 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ctcacattcccttgctgaagccatgtcagtttcactaccattcaatggtgaaaaccattc 550
Query: 1053 ctctgcatcagaccagatgcaccagcaattctccttcatccctgatcatcacctcatgcc 1112
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 551 ctctgcatcagaccagatgcaccagcaattctccttcgtccctgatcatcacctcatgcc 610
Query: 1113 agcaacagcagctgtggttacttcttcttctgcttctcaggccaccgggaacggttacaa 1172
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 agcgacagcagctgtggttacttcttcttctgcttctcaggccaccgggaacggttacaa 670
Query: 1173 cctcgatttcagcatctcttcggcaggccttgctggtttcaatagggggacccttcagtc 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 cctcgatttcagcatctcttcggcaggccttgctggtttcaatagggggacccttcagtc 730
Query: 1233 caattctccgtcttttctgcagaggttttcacctttagacggatccactgtaccattctt 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 caattctccgtcttttctgcagaggttttcacctttagacggatccactgtaccattctt 790
Query: 1293 ccttggaggagcagctgctactgctcctgccatggagannnnnnnnnnnnnnnnnaacct 1352
|||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 791 ccttggaggagcagctgctactgctcctgccatggagaaccaccaccaccaccacaacct 850
Query: 1353 tcagttttcacctgtttttgatggcggcagcttgcagctttactatggcgacggatgccg 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 tcagttttcacctgtttttgatggcggcagcttgcagctttactatggcgacggatgccg 910
Query: 1413 gcattcagatcagaaggggaaggctaaaaactgag 1447
|||||||||||||||||||||||||||||||||||
Sbjct: 911 gcattcagatcagaaggggaaggctaaaaactgag 945
Score = 270 bits (136), Expect = 2e-71
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 504 aaaccagaaccaaaaccaaaaccagagccagaacctttctttgtcaaaatctggttgtag 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aaaccagaaccaaaaccaaaaccagagccagaacctttctttgtcaaaatctggttgtag 61
Query: 564 cagcacctcagagacaagcaaaggctctggtttgtccctctccaggtctgacattcgtgt 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cagcacctcagagacaagcaaaggctctggtttgtccctctccaggtctgacattcgtgt 121
Query: 624 gaaccgtgtcaaggct 639
||||||||||||||||
Sbjct: 122 gaaccgtgtcaaggct 137
>gnl|LJGI|AV416048 homologue to UniRef100_A7Q165 Cluster: Chromosome chr10
scaffold_43, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr10 scaffold_43, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 409
Score = 807 bits (407), Expect = 0.0
Identities = 407/407 (100%)
Strand = Plus / Plus
Query: 74 acaagataggtcctagaagagggaatgaggaagaggatggaggaggaggaaaaaatggtg 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 acaagataggtcctagaagagggaatgaggaagaggatggaggaggaggaaaaaatggtg 62
Query: 134 gcagcaacacaaacaggttcagcaattggaaccaccactcctcaagaatcattagagttt 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gcagcaacacaaacaggttcagcaattggaaccaccactcctcaagaatcattagagttt 122
Query: 194 ctagagcatctggggggaaagacaggcacagcaaggtcatgacttcaaagggttcaagag 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ctagagcatctggggggaaagacaggcacagcaaggtcatgacttcaaagggttcaagag 182
Query: 254 acagaagggttaggctatctgttaccacagctattcagttctatgaccttcaagatcgat 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 acagaagggttaggctatctgttaccacagctattcagttctatgaccttcaagatcgat 242
Query: 314 tgggttatgaccagccaagtaaagctgtagagtggttgataaaatctgctgctgatgcca 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tgggttatgaccagccaagtaaagctgtagagtggttgataaaatctgctgctgatgcca 302
Query: 374 ttgctgagcttccttccctgcctgaaacgccagagcagcaaagtcatgagagaagaggac 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ttgctgagcttccttccctgcctgaaacgccagagcagcaaagtcatgagagaagaggac 362
Query: 434 aagggtttgatgattcagctgatgcagaggtggaactagagggtact 480
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aagggtttgatgattcagctgatgcagaggtggaactagagggtact 409
>gnl|LJGI|TC80005 similar to UniRef100_Q0D8K4 Cluster: Os07g0152000 protein; n=2;
Oryza sativa|Rep: Os07g0152000 protein - Oryza sativa
subsp. japonica (Rice), partial (27%)
Length = 697
Score = 159 bits (80), Expect = 6e-38
Identities = 149/172 (86%)
Strand = Plus / Plus
Query: 193 tctagagcatctggggggaaagacaggcacagcaaggtcatgacttcaaagggttcaaga 252
|||||||| ||||| || |||||||||||||||||||| |||||||| ||||| | |||
Sbjct: 100 tctagagcctctggtggcaaagacaggcacagcaaggtgatgacttctaaggggttaagg 159
Query: 253 gacagaagggttaggctatctgttaccacagctattcagttctatgaccttcaagatcga 312
|| ||||| |||||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 160 gatagaagagttaggctctcagtgtccacagctattcagttctatgaccttcaagatcgc 219
Query: 313 ttgggttatgaccagccaagtaaagctgtagagtggttgataaaatctgctg 364
|||||| |||||||||||| |||||||| || ||||| || ||| ||||||
Sbjct: 220 ttgggtgttgaccagccaagcaaagctgtggactggttaatcaaagctgctg 271
Score = 54.0 bits (27), Expect = 3e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 544 ttgtcaaaatctggttgtagcagcacctcagagacaagcaaaggctctggt 594
||||| ||||||| ||| ||||||| || |||||||||||||||||||||
Sbjct: 376 ttgtccaaatctgcttgcagcagcaattctgagacaagcaaaggctctggt 426
>gnl|LJGI|TC81016 similar to UniRef100_A7Q165 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 815
Score = 69.9 bits (35), Expect = 4e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 1203 tgctggtttcaatagggggacccttcagtccaattctccgtct 1245
|||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 266 tgctggttacaatagggggacccttcagtccaattcaccgtct 308