Miyakogusa Predicted Gene
- Lj4g3v2468350.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2468350.2 Non Chatacterized Hit- tr|I3SEX4|I3SEX4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.99,0,Transketolase, pyrimidine binding
domain,Transketolase-like, pyrimidine-binding domain; Thiamin
diph,CUFF.51053.2
(1203 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59871 homologue to UniRef100_O24458 Cluster: Pyruvate... 1132 0.0
gnl|LJGI|TC59934 homologue to UniRef100_A7PZ40 Cluster: Chromoso... 971 0.0
gnl|LJGI|AU088796 similar to UniRef100_O24458 Cluster: Pyruvate ... 545 e-154
gnl|LJGI|TC78639 homologue to UniRef100_O24458 Cluster: Pyruvate... 283 1e-75
gnl|LJGI|TC70149 homologue to UniRef100_A7PZ40 Cluster: Chromoso... 236 3e-61
>gnl|LJGI|TC59871 homologue to UniRef100_O24458 Cluster: Pyruvate dehydrogenase E1
beta subunit; n=1; Arabidopsis thaliana|Rep: Pyruvate
dehydrogenase E1 beta subunit - Arabidopsis thaliana
(Mouse-ear cress), partial (32%)
Length = 766
Score = 1132 bits (571), Expect = 0.0
Identities = 571/571 (100%)
Strand = Plus / Plus
Query: 1 atggcgacccttttccagggattgggagctctcacttcactatctccctccaattccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 atggcgacccttttccagggattgggagctctcacttcactatctccctccaattccaaa 255
Query: 61 aggtccctgctttcttctcgtagatccctctcagagaggaaagctggaatctttgttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aggtccctgctttcttctcgtagatccctctcagagaggaaagctggaatctttgttgtc 315
Query: 121 agatctgatgcaagggcgaaccagacaggagctcgcaagcatgatttgttgattaccaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 agatctgatgcaagggcgaaccagacaggagctcgcaagcatgatttgttgattaccaat 375
Query: 181 gcagttgcaacaaaggagggcagttctgtggcttctacatcaaaacctgggcatgaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gcagttgcaacaaaggagggcagttctgtggcttctacatcaaaacctgggcatgaactt 435
Query: 241 ctcctttttgaagccctacgtgaaggtttggaagaagaaatggagagggatcctaatgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctcctttttgaagccctacgtgaaggtttggaagaagaaatggagagggatcctaatgta 495
Query: 301 tgcgttatgggtgaagatgtaggtcattatggaggatcttacaaagtgactaaagacctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgcgttatgggtgaagatgtaggtcattatggaggatcttacaaagtgactaaagacctg 555
Query: 361 gccaacaagtttggggacctgagagttctggacacccctattgctgagaatgccttcacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gccaacaagtttggggacctgagagttctggacacccctattgctgagaatgccttcacc 615
Query: 421 ggcatgggcattggagctgccatgactggtctaaggccagttattgagggcatgaacatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ggcatgggcattggagctgccatgactggtctaaggccagttattgagggcatgaacatg 675
Query: 481 ggattcctacttctcgcattcaaccaaatctctaacaattgtgggatgctgcattacaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ggattcctacttctcgcattcaaccaaatctctaacaattgtgggatgctgcattacaca 735
Query: 541 tctggaggccagttcaaaatcccagttgtca 571
|||||||||||||||||||||||||||||||
Sbjct: 736 tctggaggccagttcaaaatcccagttgtca 766
>gnl|LJGI|TC59934 homologue to UniRef100_A7PZ40 Cluster: Chromosome chr4 scaffold_39,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_39, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 833
Score = 971 bits (490), Expect = 0.0
Identities = 490/490 (100%)
Strand = Plus / Plus
Query: 714 ccgaagtgataaccccgtgatcctttttgaacatgttttgctttacaacctcaaggagag 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ccgaagtgataaccccgtgatcctttttgaacatgttttgctttacaacctcaaggagag 62
Query: 774 aattccagatgaagagtatgtgttgtcacttgaagaagccgagatggttagacccgggga 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aattccagatgaagagtatgtgttgtcacttgaagaagccgagatggttagacccgggga 122
Query: 834 gcatgtcacgatattaacctattccaggatgaggtaccatgtcatgcaagctgcaaagac 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gcatgtcacgatattaacctattccaggatgaggtaccatgtcatgcaagctgcaaagac 182
Query: 894 attggtgaacaaggggtatgaccctgaagtaattgatatcaggtcattgaaaccgtttga 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 attggtgaacaaggggtatgaccctgaagtaattgatatcaggtcattgaaaccgtttga 242
Query: 954 tcttcacacaattgggaattcagtaaagaagacacatagggtgctgattgttgaagagtg 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcttcacacaattgggaattcagtaaagaagacacatagggtgctgattgttgaagagtg 302
Query: 1014 catgaggactggtggaattggtgctagtctgactgctgctattagtgaaaatttcaatga 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 catgaggactggtggaattggtgctagtctgactgctgctattagtgaaaatttcaatga 362
Query: 1074 ctatttggatgctcccatcgtttgtttgtcatctcaggacgtgccaaccccatatgctgg 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ctatttggatgctcccatcgtttgtttgtcatctcaggacgtgccaaccccatatgctgg 422
Query: 1134 accgttggaagaaatgacggtggttcagcctgctcagattgtgacagcagttgagcagct 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 accgttggaagaaatgacggtggttcagcctgctcagattgtgacagcagttgagcagct 482
Query: 1194 ctgccagtga 1203
||||||||||
Sbjct: 483 ctgccagtga 492
>gnl|LJGI|AU088796 similar to UniRef100_O24458 Cluster: Pyruvate dehydrogenase E1 beta
subunit; n=1; Arabidopsis thaliana|Rep: Pyruvate
dehydrogenase E1 beta subunit - Arabidopsis thaliana
(Mouse-ear cress), partial (8%)
Length = 414
Score = 545 bits (275), Expect = e-154
Identities = 311/322 (96%), Gaps = 2/322 (0%)
Strand = Plus / Plus
Query: 10 cttttccaggg-attgggagctctcacttcactatctccctccaattccaaaaggtccct 68
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 cttttccagggnattgggagctctcacttcactatctccctccaattccaaaaggtccct 68
Query: 69 gctttcttctcgtagatccctctcagagaggaaagctggaatctttgttgtcagatctga 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gctttcttctcgtagatccctctcagagaggaaagctggaatctttgttgtcagatctga 128
Query: 129 tgcaagggcgaaccagacaggagctcgcaagcatgatttgttgattaccaatgcagttgc 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tgcaagggcgaaccagacaggagctcgcaagcatgatttgttgattaccaatgcagttgc 188
Query: 189 aacaaaggagggcagttctgtggcttctacatcaaaacctgggcatgaacttctcctttt 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aacaaaggagggcagttctgtggcttctacatcaaaacctgggcatgaacttctcctttt 248
Query: 249 tgaagccctacgtgaaggtttggaagaagaaatgg-agagggatcctaatgtatgcgtta 307
||||||||||||| ||||||||||| || |||||| | |||||||||||||| ||| |||
Sbjct: 249 tgaagccctacgtnaaggtttggaaaaaaaaatggaaaagggatcctaatgtntgcntta 308
Query: 308 tgggtgaagatgtaggtcatta 329
||||| || |||| ||||||||
Sbjct: 309 tgggtnaaaatgtnggtcatta 330
>gnl|LJGI|TC78639 homologue to UniRef100_O24458 Cluster: Pyruvate dehydrogenase E1 beta
subunit; n=1; Arabidopsis thaliana|Rep: Pyruvate
dehydrogenase E1 beta subunit - Arabidopsis thaliana
(Mouse-ear cress), partial (25%)
Length = 635
Score = 283 bits (143), Expect = 1e-75
Identities = 269/311 (86%)
Strand = Plus / Plus
Query: 891 gacattggtgaacaaggggtatgaccctgaagtaattgatatcaggtcattgaaaccgtt 950
|||| |||||||||| |||||||| ||||| || ||||| |||||||| |||||||| ||
Sbjct: 1 gacactggtgaacaaagggtatgatcctgaggtgattgacatcaggtctttgaaaccatt 60
Query: 951 tgatcttcacacaattgggaattcagtaaagaagacacatagggtgctgattgttgaaga 1010
||| ||||||||||| ||||||||||| ||||| || ||| | ||||||||||| |||||
Sbjct: 61 tgaccttcacacaatagggaattcagtgaagaaaactcatcgtgtgctgattgtggaaga 120
Query: 1011 gtgcatgaggactggtggaattggtgctagtctgactgctgctattagtgaaaatttcaa 1070
||||||| | |||||||||||||||||||| || || |||||||| | ||||||||||||
Sbjct: 121 gtgcatgcgtactggtggaattggtgctagccttacagctgctatcactgaaaatttcaa 180
Query: 1071 tgactatttggatgctcccatcgtttgtttgtcatctcaggacgtgccaaccccatatgc 1130
|||||||||||||||||| | || ||||| || |||||||| |||||||||||||| |
Sbjct: 181 tgactatttggatgctcctgttgtgtgtttatcctctcaggatgtgccaaccccatacac 240
Query: 1131 tggaccgttggaagaaatgacggtggttcagcctgctcagattgtgacagcagttgagca 1190
|| || ||||| ||| ||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 241 agggccattggaggaatggacagtggtgcaacctgctcagattgtgacagcagttgagca 300
Query: 1191 gctctgccagt 1201
||| |||||||
Sbjct: 301 gctatgccagt 311
>gnl|LJGI|TC70149 homologue to UniRef100_A7PZ40 Cluster: Chromosome chr4 scaffold_39,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_39, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 537
Score = 236 bits (119), Expect = 3e-61
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 1085 ctcccatcgtttgtttgtcatctcaggacgtgccaaccccatatgctggaccgttggaag 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcccatcgtttgtttgtcatctcaggacgtgccaaccccatatgctggaccgttggaag 60
Query: 1145 aaatgacggtggttcagcctgctcagattgtgacagcagttgagcagctctgccagtga 1203
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatgacggtggttcagcctgctcagattgtgacagcagttgagcagctctgccagtga 119