Miyakogusa Predicted Gene
- Lj4g3v2422680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2422680.1 tr|E1Z533|E1Z533_CHLVA Expressed protein
OS=Chlorella variabilis GN=CHLNCDRAFT_138026 PE=4
SV=1,40,0.00000000009,no description,NULL; seg,NULL; MRP-S28,Ribosomal
protein S24/S35, mitochondrial, conserved domain; M,CUFF.51012.1
(1233 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58354 similar to UniRef100_A7PGY2 Cluster: Chromosome... 2206 0.0
>gnl|LJGI|TC58354 similar to UniRef100_A7PGY2 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (78%)
Length = 1641
Score = 2206 bits (1113), Expect = 0.0
Identities = 1122/1125 (99%)
Strand = Plus / Plus
Query: 109 tcactcgccgccgtcacaaatcgtttccggcccaggctcttctcctccgatgaaaccccc 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tcactcgccgccgtcacaaatcgtttccggcccaggctcttctcctccgatgaaaccccc 216
Query: 169 aaaagccccgttcctcaagaacccgaagaaatcaaggacgtcgataacaaagagttcaaa 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 aaaagccccgttcctcaagaacccgaagaaatcaaggacgtcgataacaaagagttcaaa 276
Query: 229 aagatgattgatcaatacctcaagggcgacgaggaggttcttccgttgatacaggaggcg 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aagatgattgatcaatacctcaagggcgacgaggaggttcttccgttgatacaggaggcg 336
Query: 289 attctgatacggaggttatcggggaagcatgatgacactgatgacgagatgatggatgag 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 attctgatacggaggttatcggggaagcatgatgacactgatgacgagatgatggatgag 396
Query: 349 ctccgcatggggcctctggatgatgtcagtgacagggagttcgaggaggatttcgaggag 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctccgcatggggcctctggatgatgtcagtgacagggagttcgaggaggatttcgaggag 456
Query: 409 gcgcatcagaccgatgaggagatcgatgatctgtataatgctagggatgtggtgcagaag 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gcgcatcagaccgatgaggagatcgatgatctgtataatgctagggatgtggtgcagaag 516
Query: 469 aggatggttcatgatgagtacttcaacatggatcccaagaagtgggatgaaattgttcag 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 aggatggttcatgatgagtacttcaacatggatcccaagaagtgggatgaaattgttcag 576
Query: 529 gatggggtcaaccatggttttcttaaggataccaaggagtgtgaggagattcttgaggat 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gatggggtcaaccatggttttcttaaggataccaaggagtgtgaggagattcttgaggat 636
Query: 589 atgctcagctgggacaagctcctcccagatgagataaaacagaaggtggagataaaattt 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 atgctcagctgggacaagctcctcccagatgagataaaacagaaggtggagataaaattt 696
Query: 649 aatgagctaggcgacatgtgtgaaagaggtgaacttgaacctgaagcatcttatgaacag 708
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 697 aatgagctaggcgacatgtgtgaaagaggggaacttgaacctgaagcagcttatgaacag 756
Query: 709 tttaagaagtttgaggatgagatggtcatggagtacatgaagattatggagaaagaggag 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 tttaagaagtttgaggatgagatggtcatggagtacatgaagattatggagaaagaggag 816
Query: 769 gccccgcagtcggatgacactgctgtcccagacaagaaaaaagagtcagatgacccacca 828
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 gccccgcagtcagatgacactgctgtcccagacaagaaaaaagagtcagatgacccacca 876
Query: 829 ggtgaaggtccaattctccgctgggtaacccgggcagtatttgctcccggtggcgatgca 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 ggtgaaggtccaattctccgctgggtaacccgggcagtatttgctcccggtggcgatgca 936
Query: 889 tggcatccaaagaacaggaaagttaaactatctgttacggtgaaagagcttggactttca 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 tggcatccaaagaacaggaaagttaaactatctgttacggtgaaagagcttggactttca 996
Query: 949 aaataccaatttcgccgtctcagagaattggttggaaaacgttatcatccagggagagat 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 aaataccaatttcgccgtctcagagaattggttggaaaacgttatcatccagggagagat 1056
Query: 1009 gagcttacaataactagtgagaggtatgaacatcgtgaagaaaacagaaaggattgtcta 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 gagcttacaataactagtgagaggtatgaacatcgtgaagaaaacagaaaggattgtcta 1116
Query: 1069 aggactcttctctctctcattgaggaggctggaaaagctaataaactagtggataatgcc 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 aggactcttctctctctcattgaggaggctggaaaagctaataaactagtggataatgcc 1176
Query: 1129 cggacttcatatgccaaagaaagactccgagcaaatccagctttcatggccagactgcat 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1177 cggacttcatatgccaaagaaagactccgagcaaatccagctttcatggccagactgcat 1236
Query: 1189 gctaaatccatgagagtacgagaatctaatcagattcctgcttaa 1233
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1237 gctaaatccatgagagtacgagaatctaatcagattcctgcttaa 1281
Score = 133 bits (67), Expect = 3e-30
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 atgagacgaactctgctcagaaatgcttctctcctctatactcggaatcttcttcttcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 atgagacgaactctgctcagaaatgcttctctcctctatactcggaatcttcttcttcac 108
Query: 61 tcttctt 67
|||||||
Sbjct: 109 tcttctt 115