Miyakogusa Predicted Gene
- Lj4g3v2412610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2412610.1 Non Chatacterized Hit- tr|I1L4A0|I1L4A0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54918
PE,76.38,0,DUF789,Protein of unknown function DUF789; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.51005.1
(990 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78165 homologue to UniRef100_A7PGX7 Cluster: Chromoso... 383 e-105
gnl|LJGI|BE122520 78 1e-13
gnl|LJGI|TC73529 weakly similar to UniRef100_A7PGX7 Cluster: Chr... 76 5e-13
gnl|LJGI|TC81479 weakly similar to UniRef100_A7Q0H9 Cluster: Chr... 64 2e-09
>gnl|LJGI|TC78165 homologue to UniRef100_A7PGX7 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 473
Score = 383 bits (193), Expect = e-105
Identities = 203/205 (99%), Gaps = 1/205 (0%)
Strand = Plus / Plus
Query: 1 atgctggggactgcactgcagtttggtggtgttcgtggtggtgatgatcggttctatatt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 269 atgctggggactgcactgcagtttggtggtgttcgtggtggtgatgaccggttctatatt 328
Query: 61 ccggtgaaggcaaggaagaatcagaatcagcgtaaacaagctcagaaagctgaaagtggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ccggtgaaggcaaggaagaatcagaatcagcgtaaacaagctcagaaagctgaaagtggt 388
Query: 121 ggtgattcaacacccaagag-taaacttgttgctgctgaaaatgagagtcctgaaactct 179
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ggtgattcaacacccaagagataaacttgttgctgctgaaaatgagagtcctgaaactct 448
Query: 180 ttgtccatctgtggagtctattagt 204
|||||||||||||||||||||||||
Sbjct: 449 ttgtccatctgtggagtctattagt 473
>gnl|LJGI|BE122520
Length = 383
Score = 77.8 bits (39), Expect = 1e-13
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 946 ggaagtggtggtgctcatgctccagtactggtttatccc 984
|||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggaagtggtggtgctcatgctccagtactggtttatccc 357
>gnl|LJGI|TC73529 weakly similar to UniRef100_A7PGX7 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (68%)
Length = 1976
Score = 75.8 bits (38), Expect = 5e-13
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 835 agttggatgtctgttgcatggtatcctatatatagaatacccacaggggcaacattaaaa 894
|||||||| ||||| ||||||||||| || || || ||||| ||||| |||||||||||
Sbjct: 1065 agttggatatctgtggcatggtatccaatttacaggataccaacaggtccaacattaaaa 1124
Query: 895 gatttagatgcctgctttctaacataccat 924
||| | ||||| |||||||| |||||||||
Sbjct: 1125 gatctggatgcttgctttctgacataccat 1154
Score = 60.0 bits (30), Expect = 3e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 329 tgtgggaatcgtttaaggagtggagtgcatatggagcaggagtgcc 374
|||||||||| || | ||||||||||||||||||||| ||||||||
Sbjct: 556 tgtgggaatctttcagggagtggagtgcatatggagctggagtgcc 601
>gnl|LJGI|TC81479 weakly similar to UniRef100_A7Q0H9 Cluster: Chromosome chr7
scaffold_42, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 470
Score = 63.9 bits (32), Expect = 2e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 329 tgtgggaatcgtttaaggagtggagtgcatatggagcagg 368
||||||| |||||||||||||||||||||||||| |||||
Sbjct: 370 tgtgggagtcgtttaaggagtggagtgcatatggggcagg 409