Miyakogusa Predicted Gene
- Lj4g3v2409500.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2409500.1 Non Chatacterized Hit- tr|I1K3D1|I1K3D1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50115
PE,81.01,0,SUBFAMILY NOT NAMED,NULL; VERNALIZATION-INSENSITIVE PROTEIN
3,NULL; DUF1423,Protein of unknown funct,CUFF.51115.1
(2415 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65507 similar to UniRef100_A7P3Z4 Cluster: Chromosome... 1152 0.0
gnl|LJGI|TC61140 similar to UniRef100_A7P3Z4 Cluster: Chromosome... 1061 0.0
gnl|LJGI|GO012748 similar to UniRef100_A7P3Z4 Cluster: Chromosom... 648 0.0
gnl|LJGI|TC77012 similar to UniRef100_A7P3Z4 Cluster: Chromosome... 149 1e-34
gnl|LJGI|TC67773 similar to UniRef100_A7P3Z4 Cluster: Chromosome... 94 5e-18
>gnl|LJGI|TC65507 similar to UniRef100_A7P3Z4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (15%)
Length = 719
Score = 1152 bits (581), Expect = 0.0
Identities = 581/581 (100%)
Strand = Plus / Plus
Query: 1835 acagcatgccgaattttcccgcttctggtatttcctcaaaggatttgacagcctctcaag 1894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acagcatgccgaattttcccgcttctggtatttcctcaaaggatttgacagcctctcaag 60
Query: 1895 ctaaccttccaaaggacacaccatctctttcaaaatctaactctctagtaccaagctacg 1954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctaaccttccaaaggacacaccatctctttcaaaatctaactctctagtaccaagctacg 120
Query: 1955 cttatgacttgagctattcgaggtcacattctgatgccgtgaccaatgatcttcatcaga 2014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttatgacttgagctattcgaggtcacattctgatgccgtgaccaatgatcttcatcaga 180
Query: 2015 aagacctcaaagcttccctattaagtgaagcaaaaagtgatgccgatatccaattggcgg 2074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagacctcaaagcttccctattaagtgaagcaaaaagtgatgccgatatccaattggcgg 240
Query: 2075 ccttattgagaagaggcggtgttgagaatttggagagcatcgtgcggataaaggaggccg 2134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccttattgagaagaggcggtgttgagaatttggagagcatcgtgcggataaaggaggccg 300
Query: 2135 aagccaaaatgttccaaaccaaggcggacgaagcaaggagagaggcagaagggttccaga 2194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagccaaaatgttccaaaccaaggcggacgaagcaaggagagaggcagaagggttccaga 360
Query: 2195 agatgatcaggacaaagactgcacagatggaggatgagtatgctgcaaagcttggtaaac 2254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agatgatcaggacaaagactgcacagatggaggatgagtatgctgcaaagcttggtaaac 420
Query: 2255 tctgtttgcacgatactgaggaaacgcagaggaagaaactggatgaggtgaaagtcttgg 2314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctgtttgcacgatactgaggaaacgcagaggaagaaactggatgaggtgaaagtcttgg 480
Query: 2315 agagttcctatgttgattattataaaatgaaaaagagaatgcaagatgagattgacggtt 2374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agagttcctatgttgattattataaaatgaaaaagagaatgcaagatgagattgacggtt 540
Query: 2375 tgttgcagagaatggaggcaacaaagcagcaatgggtttga 2415
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgttgcagagaatggaggcaacaaagcagcaatgggtttga 581
>gnl|LJGI|TC61140 similar to UniRef100_A7P3Z4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 751
Score = 1061 bits (535), Expect = 0.0
Identities = 535/535 (100%)
Strand = Plus / Plus
Query: 1 atgattggaagtaaagatcttcctcatggtggtgttgactcagagggtgagaactccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 atgattggaagtaaagatcttcctcatggtggtgttgactcagagggtgagaactccaga 276
Query: 61 aacaacctctcaagacacaattttgagcctagaaaggactacccagatgaaaaactagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aacaacctctcaagacacaattttgagcctagaaaggactacccagatgaaaaactagga 336
Query: 121 tacccagaaaacaaaggtgttgaatttctcagagattcaatgatgggtagtggtggtggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tacccagaaaacaaaggtgttgaatttctcagagattcaatgatgggtagtggtggtggt 396
Query: 181 ggtggaagctcagggtttcaagaactcaccctcagctacctttgtgatagctccaaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ggtggaagctcagggtttcaagaactcaccctcagctacctttgtgatagctccaaattg 456
Query: 241 aatcttgctgatcctggtggtaaaagcttgctgaattccttgacacacaaaggtaaagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aatcttgctgatcctggtggtaaaagcttgctgaattccttgacacacaaaggtaaagag 516
Query: 301 gttgttgtttctgaggttgcaaatcaagatgggaaatgggtggagagagattttcttagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gttgttgtttctgaggttgcaaatcaagatgggaaatgggtggagagagattttcttagc 576
Query: 361 ttgagtgaaaccagagaggattcatcaaagcgatctcttgaggaagatgatgttgagagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ttgagtgaaaccagagaggattcatcaaagcgatctcttgaggaagatgatgttgagagg 636
Query: 421 gggagtaacagggagaagaagccaaaaatggagacactgaatctatctcttgctttgcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gggagtaacagggagaagaagccaaaaatggagacactgaatctatctcttgctttgcct 696
Query: 481 gatgtgtcactttctctcacagcttcaaacgccttgcagaacattgatcatcacc 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gatgtgtcactttctctcacagcttcaaacgccttgcagaacattgatcatcacc 751
>gnl|LJGI|GO012748 similar to UniRef100_A7P3Z4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (12%)
Length = 331
Score = 648 bits (327), Expect = 0.0
Identities = 330/331 (99%)
Strand = Plus / Plus
Query: 1233 gattttagtcactgtgaagatggggttgacaagcttcttatctggaaaagttcatttgtc 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gattttagtcactgtgaagatggggttgacaagcttcttatctggaaaagttcatttgtc 60
Query: 1293 tgagatggtggagattttcttgtataggagatgtagaaatgtgacctgcaagcacttgct 1352
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61 tgagatggtggagattttcttgtataggagatgtataaatgtgacctgcaagcacttgct 120
Query: 1353 tcctgttgatgactgtgactgcaagatttgctcagggaacaaagggttttgcagctcttg 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcctgttgatgactgtgactgcaagatttgctcagggaacaaagggttttgcagctcttg 180
Query: 1413 catgtgtcctgtttgtttgaactttgattgtgcaagcaacacttgtagttggattggttg 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catgtgtcctgtttgtttgaactttgattgtgcaagcaacacttgtagttggattggttg 240
Query: 1473 tgatgtttgttctcactggtgccatgctgcttgtggtattcagaggaacctcatcaagcc 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgatgtttgttctcactggtgccatgctgcttgtggtattcagaggaacctcatcaagcc 300
Query: 1533 tgggcctagcttgaaggggccttcagggacc 1563
|||||||||||||||||||||||||||||||
Sbjct: 301 tgggcctagcttgaaggggccttcagggacc 331
>gnl|LJGI|TC77012 similar to UniRef100_A7P3Z4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (13%)
Length = 670
Score = 149 bits (75), Expect = 1e-34
Identities = 253/311 (81%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 2104 ttggagagcatcgtgcggataaaggaggccgaagccaaaatgttccaaaccaaggcggac 2163
||||||||||| ||| ||||||||||||| ||||||| ||||||||| |||||||| ||
Sbjct: 112 ttggagagcattgtgaggataaaggaggcagaagccagaatgttccagaccaaggcagat 171
Query: 2164 gaagcaaggagagaggcagaagggttccagaagatgatcaggacaaagactgcacagatg 2223
||||| ||||||||||||||||||||||| | |||||||| ||| ||| | || || ||
Sbjct: 172 gaagcgaggagagaggcagaagggttccataggatgatcaagaccaaggcagcgcaagtg 231
Query: 2224 gaggatgagtatgctgcaaagcttggtaaactctgtttgcacgata-ctgaggaaacgca 2282
|| || |||||||||| | ||||||| ||||| ||||||| || | | |||| || ||
Sbjct: 232 gaagaagagtatgctgaacagcttggaaaactgagtttgcaagagaccggagggaaggcg 291
Query: 2283 gaggaagaaactggatgaggtgaaagtcttggagagttcctatgttgattattataaaat 2342
|||||||||| | || ||| | | | ||| | |||| || ||||||| | ||||
Sbjct: 292 gaggaagaaattagaggagctcgacatgttgaaagattcccattttgattacttccaaat 351
Query: 2343 gaaaaagagaatgcaagatgagattgacggtttgttgcagagaatggaggcaacaaagca 2402
||||| ||||||||||||||||||||| |||||||| |||||||||||| ||||||| |
Sbjct: 352 gaaaatgagaatgcaagatgagattgatagtttgttgaagagaatggaggtaacaaagta 411
Query: 2403 gcaatgggttt 2413
|| ||| ||||
Sbjct: 412 gcgatgtgttt 422
>gnl|LJGI|TC67773 similar to UniRef100_A7P3Z4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 775
Score = 93.7 bits (47), Expect = 5e-18
Identities = 181/224 (80%), Gaps = 5/224 (2%)
Strand = Plus / Plus
Query: 287 acaaaggtaaagaggttgttgtttctgaggttgcaaatcaagatgggaaatgggtggaga 346
||||||||||||| |||||||||||||| | | ||||| |||| ||||||||| || |
Sbjct: 431 acaaaggtaaagaagttgttgtttctgaaaattccaatcaggatgagaaatgggtagaaa 490
Query: 347 gagattttcttagcttgagtgaaaccagagaggattcatcaaagcgatctcttgaggaag 406
||||||||||||| ||||||||||| || ||| |||| |||||| || ||||||||
Sbjct: 491 gagattttcttagtttgagtgaaactagggagaattcttcaaagagaatcattgaggaaa 550
Query: 407 atgatgttgagagggggagta-acagggagaagaagccaaaaatggagacactgaatcta 465
| ||| | ||| || | | | || |||||||| ||| | ||||| || |||||
Sbjct: 551 agtgtgt----aagggaagaagataaggggaagaagcaaaagcttgagacgcttaatctc 606
Query: 466 tctcttgctttgcctgatgtgtcactttctctcacagcttcaaa 509
||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 607 tctcttgctttgcctgatgtggcactttctctcacagcttcaaa 650
Score = 61.9 bits (31), Expect = 2e-08
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 597 ttcaaatgattacactgcagcttctttgtcttactcttattcccacc 643
||||||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 720 ttcaaatgattacacagcagcttctttgtcacactcttattctcacc 766