Miyakogusa Predicted Gene

Lj4g3v2403200.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2403200.1 Non Chatacterized Hit- tr|K4A7J0|K4A7J0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si034846,48.31,0.000000000000003,DNase
I-like,Endonuclease/exonuclease/phosphatase; Inositol polyphosphate
phosphatase, catalyti,Inos,CUFF.50996.1
         (1074 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC599980 homologue to UniRef100_A7PM18 Cluster: Chromos...   293   1e-78
gnl|LJGI|BP084176 similar to UniRef100_A7P407 Cluster: Chromosom...   161   1e-38

>gnl|LJGI|DC599980 homologue to UniRef100_A7PM18 Cluster: Chromosome chr14
           scaffold_21, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (5%)
          Length = 564

 Score =  293 bits (148), Expect = 1e-78
 Identities = 160/164 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtggcctacattagtggctaataagatactcaaaaagagattaggaagcaacaacttc 60
           |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||
Sbjct: 382 atgtggcctacattagtggctaataagatactcaaaaagagattaggaaagcacaacttc 441

                                                                       
Query: 61  atagcagattatcctagatatgaagaacccttgttgggtattgcagacattgatcatagc 120
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atagcagattatcctaaatatgaagaacccttgttgggtattgcagacattgatcatagc 501

                                                       
Query: 121 tcaaaaacagttctcaatgatcacaaggacacacaaaaatacaa 164
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tcaaaaacagttctcaatgatcacaaggacacacaaaaatacaa 545


>gnl|LJGI|BP084176 similar to UniRef100_A7P407 Cluster: Chromosome chr1 scaffold_5,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_5, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (13%)
          Length = 353

 Score =  161 bits (81), Expect = 1e-38
 Identities = 88/89 (98%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                        
Query: 987  agacatgtactatggctgtttttatcatggaaaaaagc-cagagaagaggagagcaccag 1045
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 353  agacatgtactatggctgtttttatcatggaaaaaagcncagagaagaggagagcaccag 294

                                         
Query: 1046 catggtgtgatcgaatagtatggtacggg 1074
            |||||||||||||||||||||||||||||
Sbjct: 293  catggtgtgatcgaatagtatggtacggg 265