Miyakogusa Predicted Gene

Lj4g3v2402180.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2402180.1 Non Chatacterized Hit- tr|J3L9W8|J3L9W8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB02G1,36.96,2e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR,Pentatricopeptide repeat; PPR: pentatricopeptid,CUFF.50971.1
         (441 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73198 similar to UniRef100_A7NZZ6 Cluster: Chromosome...   392   e-109

>gnl|LJGI|TC73198 similar to UniRef100_A7NZZ6 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 487

 Score =  392 bits (198), Expect = e-109
 Identities = 198/198 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctccgtcaccccgcattccccaaccaccgcaccctcgcttccctcttcagaacctgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 atgctccgtcaccccgcattccccaaccaccgcaccctcgcttccctcttcagaacctgc 349

                                                                       
Query: 61  accttcctctcttccctctcattcggcctctcccttcactcgctatccctcaaactcgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 accttcctctcttccctctcattcggcctctcccttcactcgctatccctcaaactcgcc 409

                                                                       
Query: 121 ctctcccacgaccctttccccgcttctgctctcgttgccttctactccaagttccgcctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ctctcccacgaccctttccccgcttctgctctcgttgccttctactccaagttccgcctc 469

                             
Query: 181 ccccaccacgcgcgcagg 198
           ||||||||||||||||||
Sbjct: 470 ccccaccacgcgcgcagg 487