Miyakogusa Predicted Gene
- Lj4g3v2401010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2401010.1 Non Chatacterized Hit- tr|C5YM72|C5YM72_SORBI
Putative uncharacterized protein Sb07g022700
OS=Sorghu,48.67,0.000000000000004,seg,NULL; ZINC_FINGER_C2H2_2,Zinc
finger, C2H2; zf-C2H2,Zinc finger, C2H2; ZINC_FINGER_C2H2_1,Zinc
f,CUFF.50958.1
(1266 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60011 similar to UniRef100_A7PHC7 Cluster: Chromosome... 2510 0.0
gnl|LJGI|BW623067 homologue to UniRef100_A7PUY6 Cluster: Chromos... 56 6e-07
gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 56 6e-07
gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromoso... 52 9e-06
>gnl|LJGI|TC60011 similar to UniRef100_A7PHC7 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 1876
Score = 2510 bits (1266), Expect = 0.0
Identities = 1266/1266 (100%)
Strand = Plus / Plus
Query: 1 atgttagacaatactgcttcttcttctggtgcaccatcttcttctgatattgctgctttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atgttagacaatactgcttcttcttctggtgcaccatcttcttctgatattgctgctttt 257
Query: 61 gcattatcagaaaatggagtgcttaacaacaaaagaaaaagaagaccagcaggcacacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gcattatcagaaaatggagtgcttaacaacaaaagaaaaagaagaccagcaggcacacca 317
Query: 121 gatccagatgctgaggtggtgtccctctcacccaagaccttactagaatcagacaggtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gatccagatgctgaggtggtgtccctctcacccaagaccttactagaatcagacaggtat 377
Query: 181 gtgtgtgagatctgcaaccaaggctttcagagggaccagaatctgcaaatgcacaggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gtgtgtgagatctgcaaccaaggctttcagagggaccagaatctgcaaatgcacaggaga 437
Query: 241 aggcacaaggtgccatggaaactcctgaaaagagaaaccacacaagggcagaagaaaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aggcacaaggtgccatggaaactcctgaaaagagaaaccacacaagggcagaagaaaagg 497
Query: 301 gtgtttgtgtgccctgagccaagttgtttgcaccatgacccttgccatgcccttggtgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtgtttgtgtgccctgagccaagttgtttgcaccatgacccttgccatgcccttggtgac 557
Query: 361 cttgttggaatcaagaaacacttcaggaggaagcacagcaatcacaagcagtgggtttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cttgttggaatcaagaaacacttcaggaggaagcacagcaatcacaagcagtgggtttgt 617
Query: 421 gacaaatgtaacaaagggtatgctgtgcaatctgattacaaggcgcatgtcaaaacatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gacaaatgtaacaaagggtatgctgtgcaatctgattacaaggcgcatgtcaaaacatgt 677
Query: 481 ggtaccagagggcactcgtgtgactgtggccgtgtgttttccagggtggagagtttcata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ggtaccagagggcactcgtgtgactgtggccgtgtgttttccagggtggagagtttcata 737
Query: 541 gaacatcaagatacatgcaatatgcggctgccacggcaagagttacaagcacttcaacct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gaacatcaagatacatgcaatatgcggctgccacggcaagagttacaagcacttcaacct 797
Query: 601 gcatgctcttctagaacagcttcaagcacaagtccatcaaatgaggccaattttagcata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gcatgctcttctagaacagcttcaagcacaagtccatcaaatgaggccaattttagcata 857
Query: 661 gccccattgcaaggacttccactgccaaaaccaccaccagctgatcagccatcaacttca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gccccattgcaaggacttccactgccaaaaccaccaccagctgatcagccatcaacttca 917
Query: 721 aacacacacaacttagaacttcagctcttatcaccttcttcaacaatccccaaagaaaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 aacacacacaacttagaacttcagctcttatcaccttcttcaacaatccccaaagaaaat 977
Query: 781 agaaatcccagggaaaaccataatgagacccgtttgaagctctcaataggttcatgtact 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 agaaatcccagggaaaaccataatgagacccgtttgaagctctcaataggttcatgtact 1037
Query: 841 aataatgatggtcacatagggaatgaagaatcagaaaggaataataataataatgttgtg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 aataatgatggtcacatagggaatgaagaatcagaaaggaataataataataatgttgtg 1097
Query: 901 ggtgataattccattttcgaagtggcaaggctgaaagagtttgctggtgaggaactcaag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1098 ggtgataattccattttcgaagtggcaaggctgaaagagtttgctggtgaggaactcaag 1157
Query: 961 ttggcgatggcggagaaggcttacgcggaagaggctaggagagaagcgaagcgccaaatt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1158 ttggcgatggcggagaaggcttacgcggaagaggctaggagagaagcgaagcgccaaatt 1217
Query: 1021 gagatagctgaggttgagtttgagaatgctaagaggataaggaaacaagcgcaagctgag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1218 gagatagctgaggttgagtttgagaatgctaagaggataaggaaacaagcgcaagctgag 1277
Query: 1081 cttggaaaagctgaagatttgagaaagcaagcaatgaagaagattagctccactgttatg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1278 cttggaaaagctgaagatttgagaaagcaagcaatgaagaagattagctccactgttatg 1337
Query: 1141 gaaataacttgtcaagcttgcaagcagcagtttcagaactcaactgttgcatcagatcaa 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1338 gaaataacttgtcaagcttgcaagcagcagtttcagaactcaactgttgcatcagatcaa 1397
Query: 1201 gaaacttccattgtggtgagttacgtgtcctcagccaacacagaaggcgaagctgcagaa 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1398 gaaacttccattgtggtgagttacgtgtcctcagccaacacagaaggcgaagctgcagaa 1457
Query: 1261 gaatga 1266
||||||
Sbjct: 1458 gaatga 1463
>gnl|LJGI|BW623067 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 516
Score = 56.0 bits (28), Expect = 6e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 193 tgcaaccaaggctttcagagggaccagaatctgcaaatgcacaggagaaggcacaaggtg 252
|||||| |||| ||||||||||||||||||||||| | ||| ||||| | ||||| ||
Sbjct: 310 tgcaacaaagggtttcagagggaccagaatctgcagcttcaccggagaggtcacaatctg 369
Query: 253 ccatggaa 260
||||||||
Sbjct: 370 ccatggaa 377
>gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 951
Score = 56.0 bits (28), Expect = 6e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 193 tgcaaccaaggctttcagagggaccagaatctgcaaatgcacaggagaaggcacaaggtg 252
|||||| |||| ||||||||||||||||||||||| | ||| ||||| | ||||| ||
Sbjct: 290 tgcaacaaagggtttcagagggaccagaatctgcagcttcaccggagaggtcacaatctg 349
Query: 253 ccatggaa 260
||||||||
Sbjct: 350 ccatggaa 357
>gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 1231
Score = 52.0 bits (26), Expect = 9e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 181 gtgtgtgagatctgcaaccaaggctttcagagggacca 218
|||||||||||||||||| |||||||||| || |||||
Sbjct: 532 gtgtgtgagatctgcaacaaaggctttcaaagagacca 569