Miyakogusa Predicted Gene

Lj4g3v2400860.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2400860.1 Non Chatacterized Hit- tr|I1K261|I1K261_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,67.25,0,DUF4413,Domain of unknown function DUF4413;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; UNCHARACTERI,CUFF.50942.1
         (1249 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76484 weakly similar to UniRef100_Q9LS83 Cluster: Sim...   161   1e-38

>gnl|LJGI|TC76484 weakly similar to UniRef100_Q9LS83 Cluster: Similarity to Ac-like
           transposase; n=1; Arabidopsis thaliana|Rep: Similarity
           to Ac-like transposase - Arabidopsis thaliana (Mouse-ear
           cress), partial (6%)
          Length = 882

 Score =  161 bits (81), Expect = 1e-38
 Identities = 207/249 (83%)
 Strand = Plus / Plus

                                                                       
Query: 360 tttcaatattcgtgaaagtatggagtatattaactacaatgatgcaaggttgaagacatt 419
           ||||||| ||||||||||| |  | || || ||||||||||||||||| || ||||  ||
Sbjct: 1   tttcaatgttcgtgaaagtgtaaaatacatcaactacaatgatgcaagattaaagaactt 60

                                                                       
Query: 420 ttgtgatgttgttgaacagaagcgcttgggagttagaaaacttcttattgattgtccaac 479
           ||||||||| |||||||||||||| |||  ||  || || ||| | || ||||| |||||
Sbjct: 61  ttgtgatgtggttgaacagaagcgtttgaaagagaggaagcttatcatggattgcccaac 120

                                                                       
Query: 480 aagatggaataccacatttcatatgttgacagctgcattgaaatttaaaattgcctttgc 539
           |||||||||| | ||||||| ||||||| || |||| |||||||| || | ||| |||| 
Sbjct: 121 aagatggaattcaacatttcgtatgttggcaactgctttgaaattcaagactgcatttga 180

                                                                       
Query: 540 agcttacaaagaaagagagccccattatgattatgcaccttcacttgaagattgggacaa 599
            |||||||| |||||||||||||||||||||||| ||||||||  ||||||||||  |||
Sbjct: 181 tgcttacaaggaaagagagccccattatgattatacaccttcatctgaagattggagcaa 240

                    
Query: 600 ggttgagaa 608
            ||||||||
Sbjct: 241 agttgagaa 249