Miyakogusa Predicted Gene

Lj4g3v2400850.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2400850.1 Non Chatacterized Hit- tr|K4AXM8|K4AXM8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,46.15,3e-17,
,CUFF.50945.1
         (375 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62390 similar to UniRef100_A7NWH3 Cluster: Chromosome...   513   e-145
gnl|LJGI|TC62227 similar to UniRef100_A7NWH3 Cluster: Chromosome...    78   4e-14

>gnl|LJGI|TC62390 similar to UniRef100_A7NWH3 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (69%)
          Length = 838

 Score =  513 bits (259), Expect = e-145
 Identities = 259/259 (100%)
 Strand = Plus / Plus

                                                                       
Query: 117 tcagtcattctctggagcaattcatcctcccccacagtctgctatcctctatgagcaggt 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tcagtcattctctggagcaattcatcctcccccacagtctgctatcctctatgagcaggt 584

                                                                       
Query: 177 tttgagaagacaaagcaaagggacaggagtgtttattcctcagtcaacacagccaagaag 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tttgagaagacaaagcaaagggacaggagtgtttattcctcagtcaacacagccaagaag 644

                                                                       
Query: 237 gaagcaaaggaaaggaagaacaagttcatatgcaaaatatcaaaagcagtctcaagatac 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gaagcaaaggaaaggaagaacaagttcatatgcaaaatatcaaaagcagtctcaagatac 704

                                                                       
Query: 297 aagaatgatttctcatgttcctataaaaaatcctttcaaagaaacaaatgacagagcata 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aagaatgatttctcatgttcctataaaaaatcctttcaaagaaacaaatgacagagcata 764

                              
Query: 357 tatagatccttctgcatga 375
           |||||||||||||||||||
Sbjct: 765 tatagatccttctgcatga 783



 Score =  238 bits (120), Expect = 2e-62
 Identities = 120/120 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaggttgctgtggaacttgaggatgatctgttttttgcagacctgagcaagcaactt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  atggaggttgctgtggaacttgaggatgatctgttttttgcagacctgagcaagcaactt 152

                                                                       
Query: 61  tctctcttaattatggatgaagatgatgacccccttgcttcttgtgctgtccaccctcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 tctctcttaattatggatgaagatgatgacccccttgcttcttgtgctgtccaccctcag 212


>gnl|LJGI|TC62227 similar to UniRef100_A7NWH3 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 713

 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 114/137 (83%), Gaps = 9/137 (6%)
 Strand = Plus / Plus

                                                                       
Query: 128 ctggagcaattca---tcctcccccacagtctgctatcctctatgagcaggttttgagaa 184
           |||||||||||||   |||||| ||||||| |||  |||| |||||||||| ||||||||
Sbjct: 218 ctggagcaattcaatatcctcctccacagtttgcattcctgtatgagcaggctttgagaa 277

                                                                       
Query: 185 ga---caaagcaaagggacaggagtgtttattcctcagtcaacacagcc---aagaagga 238
           ||   || |||||||||||||| |||||||| || ||  ||||||||||   ||||||||
Sbjct: 278 gagatcagagcaaagggacaggggtgtttatcccacaagcaacacagccaataagaagga 337

                            
Query: 239 agcaaaggaaaggaaga 255
           |||| ||||| ||||||
Sbjct: 338 agcagaggaagggaaga 354