Miyakogusa Predicted Gene

Lj4g3v2400580.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2400580.1 tr|B9GWT3|B9GWT3_POPTR Tir-nbs resistance protein
OS=Populus trichocarpa GN=POPTRDRAFT_554389 PE=4
S,27.78,0.029,seg,NULL,CUFF.50918.1
         (502 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60460 similar to UniRef100_A7NWF7 Cluster: Chromosome...   262   2e-69

>gnl|LJGI|TC60460 similar to UniRef100_A7NWF7 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (91%)
          Length = 736

 Score =  262 bits (132), Expect = 2e-69
 Identities = 344/414 (83%), Gaps = 3/414 (0%)
 Strand = Plus / Plus

                                                                       
Query: 68  ttggtggctgctttgatagctgccgtgaccacactcaaggctctggaaatgggacaagga 127
           ||||||| ||||||||  |||||  |||||||||||||| || ||||   ||||||||||
Sbjct: 98  ttggtggttgctttgacggctgctttgaccacactcaagcctgtggattagggacaagga 157

                                                                       
Query: 128 tatggaacctcagtgataggccagtggagctgcaaataagggtaggatcaatactgaaga 187
           | |  ||||||||||| ||||||||||||||||| |||||||| || |||||||||||||
Sbjct: 158 tttataacctcagtgacaggccagtggagctgcagataagggtggggtcaatactgaaga 217

                                                                       
Query: 188 agatccacacattgaagccaggttcttcaaagagagtgaaatgtaaaagcatatacaagg 247
           || | ||||| ||||||||||| ||||| |||||||||||  |||||  ||||||||| |
Sbjct: 218 aggttcacactttgaagccagggtcttctaagagagtgaagagtaaacacatatacaaag 277

                                                                       
Query: 248 catatatgcctgtagctgcaggtagtggcggcggcggtggtggcaggagcttgaagaact 307
           ||||| |||||   |||| | | |   | ||| | | || |||   | | ||||||| ||
Sbjct: 278 catatgtgcctcatgctggaaggatcagaggcagtgatgttgg---gggattgaagagct 334

                                                                       
Query: 308 tgttgtactactatgatgaaacttgccacccttatatttggattcatgacacagggtgtc 367
           ||||||| ||||||||||||||||| |||||||||||||||||||||||||  ||| || 
Sbjct: 335 tgttgtattactatgatgaaacttgtcacccttatatttggattcatgacattgggggta 394

                                                                       
Query: 368 attccttaaggatggttaagcagcagtacataagccttgaggatctcagggattcttctg 427
           ||||||| |||||||| |||||||||||  |||||||||||||| | | ||| | |||||
Sbjct: 395 attccttgaggatggtgaagcagcagtatttaagccttgaggatttgaaggagttttctg 454

                                                                 
Query: 428 agatcagaatcttcagggatcatcagagaggttctatatcagttcgaaagagaa 481
           | ||||| ||||| |||||||| |||||||||| |||||||||| | |||||||
Sbjct: 455 aaatcaggatcttgagggatcagcagagaggttgtatatcagtttgtaagagaa 508