Miyakogusa Predicted Gene

Lj4g3v2376320.4

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2376320.4 Non Chatacterized Hit- tr|F6I1P0|F6I1P0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,79.31,0.0004,no
description,NULL,CUFF.50941.4
         (195 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72010 weakly similar to UniRef100_A7PNT3 Cluster: Chr...   387   e-107
gnl|LJGI|TC74549 similar to UniRef100_P52904 Cluster: Pyruvate d...   129   7e-30
gnl|LJGI|TC73465 homologue to UniRef100_A7QUS8 Cluster: Chromoso...   129   7e-30
gnl|LJGI|TC69377 similar to UniRef100_A7P2L3 Cluster: Chromosome...   127   3e-29
gnl|LJGI|TC82539 similar to UniRef100_A7P2L3 Cluster: Chromosome...   119   6e-27
gnl|LJGI|TC79043                                                       52   1e-06

>gnl|LJGI|TC72010 weakly similar to UniRef100_A7PNT3 Cluster: Chromosome chr8
           scaffold_23, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 1231

 Score =  387 bits (195), Expect = e-107
 Identities = 195/195 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaacttgtgtgaagaataacaaacgaggtttgggagcggacaaagggaagaaaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20  atggaaacttgtgtgaagaataacaaacgaggtttgggagcggacaaagggaagaaaaag 79

                                                                       
Query: 61  gctgtgaagtctgatgatagtaatgtctctgaagggaactatcagcagataaccaagggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80  gctgtgaagtctgatgatagtaatgtctctgaagggaactatcagcagataaccaagggt 139

                                                                       
Query: 121 ctgttggagaagtatggccctgagagggttcttgatactccaatcactgagatagaaaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 ctgttggagaagtatggccctgagagggttcttgatactccaatcactgagatagaaaca 199

                          
Query: 181 agcctgtacctgagg 195
           |||||||||||||||
Sbjct: 200 agcctgtacctgagg 214


>gnl|LJGI|TC74549 similar to UniRef100_P52904 Cluster: Pyruvate dehydrogenase E1
           component subunit beta, mitochondrial precursor; n=1;
           Pisum sativum|Rep: Pyruvate dehydrogenase E1 component
           subunit beta, mitochondrial precursor - Pisum sativum
           (Garden pea), partial (35%)
          Length = 643

 Score =  129 bits (65), Expect = 7e-30
 Identities = 65/65 (100%)
 Strand = Plus / Plus

                                                                       
Query: 107 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 166
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 494

                
Query: 167 ctgag 171
           |||||
Sbjct: 495 ctgag 499


>gnl|LJGI|TC73465 homologue to UniRef100_A7QUS8 Cluster: Chromosome chr1
           scaffold_180, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_180, whole genome
           shotgun sequence - Vitis vinifera (Grape), complete
          Length = 1651

 Score =  129 bits (65), Expect = 7e-30
 Identities = 65/65 (100%)
 Strand = Plus / Plus

                                                                       
Query: 107 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 166
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 438

                
Query: 167 ctgag 171
           |||||
Sbjct: 439 ctgag 443


>gnl|LJGI|TC69377 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 993

 Score =  127 bits (64), Expect = 3e-29
 Identities = 67/68 (98%)
 Strand = Plus / Plus

                                                                       
Query: 107 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 166
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 155 agataaccaagggtctgttggagaagtatgtccctgagagggttcttgatactccaatca 214

                   
Query: 167 ctgagata 174
           ||||||||
Sbjct: 215 ctgagata 222


>gnl|LJGI|TC82539 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 734

 Score =  119 bits (60), Expect = 6e-27
 Identities = 63/64 (98%)
 Strand = Plus / Plus

                                                                       
Query: 108 gataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatcac 167
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 148 gataaccaagggtctgttggagaagtatgtccctgagagggttcttgatactccaatcac 207

               
Query: 168 tgag 171
           ||||
Sbjct: 208 tgag 211


>gnl|LJGI|TC79043 
          Length = 639

 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 170 agatagaaacaagcctgtacctgagg 195
           ||||||||||||||||||||||||||
Sbjct: 94  agatagaaacaagcctgtacctgagg 119