Miyakogusa Predicted Gene
- Lj4g3v2376320.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2376320.2 Non Chatacterized Hit- tr|I3T1L3|I3T1L3_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,71.19,0.0000000000001,G_PATCH,G-patch domain; glycine rich nucleic
binding domain,G-patch domain; G-patch,G-patch domain; ,CUFF.50941.2
(264 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72010 weakly similar to UniRef100_A7PNT3 Cluster: Chr... 392 e-109
gnl|LJGI|TC69064 similar to UniRef100_A9T9J7 Cluster: Predicted ... 163 7e-40
gnl|LJGI|TC74549 similar to UniRef100_P52904 Cluster: Pyruvate d... 129 9e-30
gnl|LJGI|TC73465 homologue to UniRef100_A7QUS8 Cluster: Chromoso... 129 9e-30
gnl|LJGI|TC69377 similar to UniRef100_A7P2L3 Cluster: Chromosome... 123 6e-28
gnl|LJGI|TC82539 similar to UniRef100_A7P2L3 Cluster: Chromosome... 119 9e-27
>gnl|LJGI|TC72010 weakly similar to UniRef100_A7PNT3 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 1231
Score = 392 bits (198), Expect = e-109
Identities = 211/215 (98%), Gaps = 4/215 (1%)
Strand = Plus / Plus
Query: 54 gcagggtagactagaacccatggaaacttgtgtgaagaataacaaacgaggtttgggagc 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagggtagactagaacccatggaaacttgtgtgaagaataacaaacgaggtttgggagc 60
Query: 114 ggacaaagggaagaaaaaggctgtgaagtctgatgatagtaatgtctctgaagggaacta 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggacaaagggaagaaaaaggctgtgaagtctgatgatagtaatgtctctgaagggaacta 120
Query: 174 tcagcagataaccaagggtctgttggagaagtatggccctgagagggttcttgatactcc 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcagcagataaccaagggtctgttggagaagtatggccctgagagggttcttgatactcc 180
Query: 234 aatcactg----agaaacaagcctgtacctgaggc 264
|||||||| |||||||||||||||||||||||
Sbjct: 181 aatcactgagatagaaacaagcctgtacctgaggc 215
>gnl|LJGI|TC69064 similar to UniRef100_A9T9J7 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(23%)
Length = 804
Score = 163 bits (82), Expect = 7e-40
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 3 gctattaaagaagcaaggttggaaagaagggaatggtcttgggatatctgagcagggtag 62
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 719 gctattaaagaagcaaggttggaaagaagggaatggtcttgggatatttgagcagggtag 778
Query: 63 actagaacccatggaaacttgtgtga 88
||||||||||||||||||||||||||
Sbjct: 779 actagaacccatggaaacttgtgtga 804
>gnl|LJGI|TC74549 similar to UniRef100_P52904 Cluster: Pyruvate dehydrogenase E1
component subunit beta, mitochondrial precursor; n=1;
Pisum sativum|Rep: Pyruvate dehydrogenase E1 component
subunit beta, mitochondrial precursor - Pisum sativum
(Garden pea), partial (35%)
Length = 643
Score = 129 bits (65), Expect = 9e-30
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 179 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 494
Query: 239 ctgag 243
|||||
Sbjct: 495 ctgag 499
>gnl|LJGI|TC73465 homologue to UniRef100_A7QUS8 Cluster: Chromosome chr1
scaffold_180, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_180, whole genome
shotgun sequence - Vitis vinifera (Grape), complete
Length = 1651
Score = 129 bits (65), Expect = 9e-30
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 179 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 438
Query: 239 ctgag 243
|||||
Sbjct: 439 ctgag 443
>gnl|LJGI|TC69377 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 993
Score = 123 bits (62), Expect = 6e-28
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 179 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 238
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 155 agataaccaagggtctgttggagaagtatgtccctgagagggttcttgatactccaatca 214
Query: 239 ctgaga 244
||||||
Sbjct: 215 ctgaga 220
>gnl|LJGI|TC82539 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 734
Score = 119 bits (60), Expect = 9e-27
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 180 gataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatcac 239
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 148 gataaccaagggtctgttggagaagtatgtccctgagagggttcttgatactccaatcac 207
Query: 240 tgag 243
||||
Sbjct: 208 tgag 211