Miyakogusa Predicted Gene
- Lj4g3v2376320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2376320.1 Non Chatacterized Hit- tr|F6I1P0|F6I1P0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,79.31,0.0003,no
description,NULL,CUFF.50941.1
(327 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72010 weakly similar to UniRef100_A7PNT3 Cluster: Chr... 640 0.0
gnl|LJGI|TC79043 188 1e-47
gnl|LJGI|TC74549 similar to UniRef100_P52904 Cluster: Pyruvate d... 129 1e-29
gnl|LJGI|TC73465 homologue to UniRef100_A7QUS8 Cluster: Chromoso... 129 1e-29
gnl|LJGI|TC69377 similar to UniRef100_A7P2L3 Cluster: Chromosome... 127 5e-29
gnl|LJGI|TC82539 similar to UniRef100_A7P2L3 Cluster: Chromosome... 119 1e-26
gnl|LJGI|DC593930 similar to UniRef100_A7PNT1 Cluster: Chromosom... 90 1e-17
>gnl|LJGI|TC72010 weakly similar to UniRef100_A7PNT3 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 1231
Score = 640 bits (323), Expect = 0.0
Identities = 326/327 (99%)
Strand = Plus / Plus
Query: 1 atggaaacttgtgtgaagaataacaaacgaggtttgggagcggacaaagggaagaaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 atggaaacttgtgtgaagaataacaaacgaggtttgggagcggacaaagggaagaaaaag 79
Query: 61 gctgtgaagtctgatgatagtaatgtctctgaagggaactatcagcagataaccaagggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 gctgtgaagtctgatgatagtaatgtctctgaagggaactatcagcagataaccaagggt 139
Query: 121 ctgttggagaagtatggccctgagagggttcttgatactccaatcactgagatagaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 ctgttggagaagtatggccctgagagggttcttgatactccaatcactgagatagaaaca 199
Query: 181 agcctgtacctgaggcagtatgcacgtacaaattctgaaaagtatcagcttttcatcaat 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 200 agcctgtacctgaggcagtatgcacgtacaaattttgaaaagtatcagcttttcatcaat 259
Query: 241 ttatatgcaaaagttcttgagggacattcaccactgagctcactaggcgttctcaataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttatatgcaaaagttcttgagggacattcaccactgagctcactaggcgttctcaataat 319
Query: 301 gacacccttaagacccctttgacactg 327
|||||||||||||||||||||||||||
Sbjct: 320 gacacccttaagacccctttgacactg 346
>gnl|LJGI|TC79043
Length = 639
Score = 188 bits (95), Expect = 1e-47
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 170 agatagaaacaagcctgtacctgaggcagtatgcacgtacaaattctgaaaagtatcagc 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 agatagaaacaagcctgtacctgaggcagtatgcacgtacaaattctgaaaagtatcagc 153
Query: 230 ttttcatcaatttatatgcaaaagttcttgaggga 264
|||||||||||||||||||||||||||||||||||
Sbjct: 154 ttttcatcaatttatatgcaaaagttcttgaggga 188
>gnl|LJGI|TC74549 similar to UniRef100_P52904 Cluster: Pyruvate dehydrogenase E1
component subunit beta, mitochondrial precursor; n=1;
Pisum sativum|Rep: Pyruvate dehydrogenase E1 component
subunit beta, mitochondrial precursor - Pisum sativum
(Garden pea), partial (35%)
Length = 643
Score = 129 bits (65), Expect = 1e-29
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 107 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 494
Query: 167 ctgag 171
|||||
Sbjct: 495 ctgag 499
>gnl|LJGI|TC73465 homologue to UniRef100_A7QUS8 Cluster: Chromosome chr1
scaffold_180, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_180, whole genome
shotgun sequence - Vitis vinifera (Grape), complete
Length = 1651
Score = 129 bits (65), Expect = 1e-29
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 107 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 438
Query: 167 ctgag 171
|||||
Sbjct: 439 ctgag 443
>gnl|LJGI|TC69377 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 993
Score = 127 bits (64), Expect = 5e-29
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 107 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 166
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 155 agataaccaagggtctgttggagaagtatgtccctgagagggttcttgatactccaatca 214
Query: 167 ctgagata 174
||||||||
Sbjct: 215 ctgagata 222
>gnl|LJGI|TC82539 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 734
Score = 119 bits (60), Expect = 1e-26
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 108 gataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatcac 167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 148 gataaccaagggtctgttggagaagtatgtccctgagagggttcttgatactccaatcac 207
Query: 168 tgag 171
||||
Sbjct: 208 tgag 211
>gnl|LJGI|DC593930 similar to UniRef100_A7PNT1 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 553
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 260 agggacattcaccactgagctcactaggcgttctcaataatgacacccttaagacccctt 319
|||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| ||||
Sbjct: 157 agggacattcaccactgagctcactaggacttctcaatagtgacaccctcaagactcctt 216
Query: 320 tgaca 324
|||||
Sbjct: 217 tgaca 221