Miyakogusa Predicted Gene
- Lj4g3v2374990.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2374990.2 tr|G7JJ08|G7JJ08_MEDTR Pyrimidine-specific
ribonucleoside hydrolase rihB OS=Medicago truncatula
GN=M,80.32,0,seg,NULL; IU_nuc_hydro,Inosine/uridine-preferring
nucleoside hydrolase domain; INOSINE-URIDINE PREFE,CUFF.50888.2
(2685 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74065 weakly similar to UniRef100_A7NWB1 Cluster: Chr... 1197 0.0
gnl|LJGI|BP065288 weakly similar to UniRef100_A7NWB1 Cluster: Ch... 987 0.0
gnl|LJGI|BP054489 similar to UniRef100_A7NWB1 Cluster: Chromosom... 757 0.0
>gnl|LJGI|TC74065 weakly similar to UniRef100_A7NWB1 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 921
Score = 1197 bits (604), Expect = 0.0
Identities = 607/608 (99%)
Strand = Plus / Plus
Query: 2078 gaatcaaggaggtttatgtagttgggggacacatcagccagaatgccaatgataaaggaa 2137
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2 gaatcaaggaggtttatgtagttgggggacacatcagccagaatgccaatgatagaggaa 61
Query: 2138 acatcttttcagttccttccaaccaatatgcagaattcaacatgttcctagatcctttgg 2197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 acatcttttcagttccttccaaccaatatgcagaattcaacatgttcctagatcctttgg 121
Query: 2198 ctgccaagacagtgtttgaatctgaagttaacataacattgattcctcttagtgcacagc 2257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctgccaagacagtgtttgaatctgaagttaacataacattgattcctcttagtgcacagc 181
Query: 2258 gcaaagtaagttcattttcaaccgccataggtcagttacgtacgaaatcaacaactcctg 2317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gcaaagtaagttcattttcaaccgccataggtcagttacgtacgaaatcaacaactcctg 241
Query: 2318 aggctgtattttccaagcgtctgctgtcaagcctataccatttgaagcaaatccataaca 2377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggctgtattttccaagcgtctgctgtcaagcctataccatttgaagcaaatccataaca 301
Query: 2378 agtatcatcatatggacacattcttgggggaaattctaggtgcagtaaccttggctgata 2437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agtatcatcatatggacacattcttgggggaaattctaggtgcagtaaccttggctgata 361
Query: 2438 cttcaaaacttgatccaagatttgagctcaagcctgttaaagtcttagctgatggtgttg 2497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cttcaaaacttgatccaagatttgagctcaagcctgttaaagtcttagctgatggtgttg 421
Query: 2498 aatctactgatggaaaaattgcggtggagaaacatggaaaattagttagaattttaagtc 2557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aatctactgatggaaaaattgcggtggagaaacatggaaaattagttagaattttaagtc 481
Query: 2558 gagtgagtgccatggcttattataatttgcttgctgataagcttggcgatcataatcaat 2617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gagtgagtgccatggcttattataatttgcttgctgataagcttggcgatcataatcaat 541
Query: 2618 cagctaaggttggaagctttgaagaacaaaccagaaaatggcgtcattctcctgataaag 2677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cagctaaggttggaagctttgaagaacaaaccagaaaatggcgtcattctcctgataaag 601
Query: 2678 tgtaggca 2685
||||||||
Sbjct: 602 tgtaggca 609
>gnl|LJGI|BP065288 weakly similar to UniRef100_A7NWB1 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 530
Score = 987 bits (498), Expect = 0.0
Identities = 529/534 (99%), Gaps = 4/534 (0%)
Strand = Plus / Plus
Query: 1939 gaactcaggcaaccactagctatggaagtttgggagtctgtattacaaacaactgaacca 1998
||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 gaactcaggcaac-actagctatggaagtt-gggagtctgtattacaaacaactgaacca 58
Query: 1999 ggatctaagattacagtattaaccaatggacccttgactaatttggcaaaggttgtatca 2058
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 59 ggatctaagattacagtattaaccaatggacccttgactaatt-ggcaaaggt-gtatca 116
Query: 2059 gtagaaaacataagatctagaatcaaggaggtttatgtagttgggggacacatcagccag 2118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gtagaaaacataagatctagaatcaaggaggtttatgtagttgggggacacatcagccag 176
Query: 2119 aatgccaatgataaaggaaacatcttttcagttccttccaaccaatatgcagaattcaac 2178
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 aatgccaatgatagaggaaacatcttttcagttccttccaaccaatatgcagaattcaac 236
Query: 2179 atgttcctagatcctttggctgccaagacagtgtttgaatctgaagttaacataacattg 2238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 atgttcctagatcctttggctgccaagacagtgtttgaatctgaagttaacataacattg 296
Query: 2239 attcctcttagtgcacagcgcaaagtaagttcattttcaaccgccataggtcagttacgt 2298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 attcctcttagtgcacagcgcaaagtaagttcattttcaaccgccataggtcagttacgt 356
Query: 2299 acgaaatcaacaactcctgaggctgtattttccaagcgtctgctgtcaagcctataccat 2358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 acgaaatcaacaactcctgaggctgtattttccaagcgtctgctgtcaagcctataccat 416
Query: 2359 ttgaagcaaatccataacaagtatcatcatatggacacattcttgggggaaattctaggt 2418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttgaagcaaatccataacaagtatcatcatatggacacattcttgggggaaattctaggt 476
Query: 2419 gcagtaaccttggctgatacttcaaaacttgatccaagatttgagctcaagcct 2472
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gcagtaaccttggctgatacttcaaaacttgatccaagatttgagctcaagcct 530
>gnl|LJGI|BP054489 similar to UniRef100_A7NWB1 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 487
Score = 757 bits (382), Expect = 0.0
Identities = 382/382 (100%)
Strand = Plus / Plus
Query: 1 atgatacaacacagctgtgtttctactttgaggaggtgctgggtttctctagtactagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atgatacaacacagctgtgtttctactttgaggaggtgctgggtttctctagtactagtg 165
Query: 61 ttgttgattgtagcagcaactaatcttggaggtgctgctgtggtggatgaggccaagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ttgttgattgtagcagcaactaatcttggaggtgctgctgtggtggatgaggccaagctt 225
Query: 121 cctcgtcggattctgatggacacagatgttgatacagatgatttctttgctctgctctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 cctcgtcggattctgatggacacagatgttgatacagatgatttctttgctctgctctac 285
Query: 181 cttttgaagctcaacagatctcagtttcaattggagggaatcacgatcaatgcaaatagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 cttttgaagctcaacagatctcagtttcaattggagggaatcacgatcaatgcaaatagt 345
Query: 241 tggttagatgctggacatgctgtgaatcaaatttatgacatactttatatgatggggcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tggttagatgctggacatgctgtgaatcaaatttatgacatactttatatgatggggcga 405
Query: 301 gatgatattgcagttggagttggaggtgaaggtggaatactaccaaatggtaccatactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gatgatattgcagttggagttggaggtgaaggtggaatactaccaaatggtaccatactc 465
Query: 361 cctaatgttggtggatatcttc 382
||||||||||||||||||||||
Sbjct: 466 cctaatgttggtggatatcttc 487