Miyakogusa Predicted Gene
- Lj4g3v2374790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2374790.1 tr|G7JJ22|G7JJ22_MEDTR Helicase swr1 OS=Medicago
truncatula GN=MTR_4g118720 PE=4 SV=1,54.51,0,seg,NULL,CUFF.50916.1
(4887 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72767 940 0.0
gnl|LJGI|BW599658 702 0.0
gnl|LJGI|BW598317 260 7e-68
gnl|LJGI|TC72097 198 2e-49
gnl|LJGI|DC599972 105 3e-21
>gnl|LJGI|TC72767
Length = 482
Score = 940 bits (474), Expect = 0.0
Identities = 477/478 (99%)
Strand = Plus / Plus
Query: 3535 aatgtggatctgccctcctgtttgatggaaagtaaagaaaatattgaaggcccatccaca 3594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 aatgtggatctgccctcctgtttgatggaaagtaaagaaaatattgaaggcccatccaca 64
Query: 3595 aggactgaaaatacagagttggaaatcagtaagatgtcttcagattccccaataactgtt 3654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 aggactgaaaatacagagttggaaatcagtaagatgtcttcagattccccaataactgtt 124
Query: 3655 aaccattctgtggagagcgaactattgtcagtaaaaggaaaatcatcagaagtcgaagtt 3714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aaccattctgtggagagcgaactattgtcagtaaaaggaaaatcatcagaagtcgaagtt 184
Query: 3715 tgtgatcaaatagatgctcatcaggtttttaaggatgatctagaaaggcttacttcaaaa 3774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tgtgatcaaatagatgctcatcaggtttttaaggatgatctagaaaggcttacttcaaaa 244
Query: 3775 gatatggatgtgtcttctctttgcagtcccctagctcaggacaaaccaagtgatcctctg 3834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gatatggatgtgtcttctctttgcagtcccctagctcaggacaaaccaagtgatcctctg 304
Query: 3835 atactagaagatagttgtaggaacaatcccaaggctcccattgtaaatccattaccagag 3894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 atactagaagatagttgtaggaacaatcccaaggctcccattgtaaatccattaccagag 364
Query: 3895 cggaaatcagattgttctgaagctgagatggttgatcaaatgaaaacatctgatggtgaa 3954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cggaaatcagattgttctgaagctgagatggttgatcaaatgaaaacatctgatggtgaa 424
Query: 3955 aaggttgatccaggactgacatgtacaaacaacgaactgccttcttccttggtcacgg 4012
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 425 aaggttgatccaggactgacatgtacaaacaaggaactgccttcttccttggtcacgg 482
Score = 174 bits (88), Expect = 3e-42
Identities = 118/128 (92%)
Strand = Plus / Plus
Query: 4209 attaccagattggaaatcagaatgttctgaagctgatatggttgatccaatgaagacatc 4268
||||||||| |||||||||| |||||||||||||| |||||||||| |||||| |||||
Sbjct: 355 attaccagagcggaaatcagattgttctgaagctgagatggttgatcaaatgaaaacatc 414
Query: 4269 taatggtgaaaaggttgatccagggctgacatgtacaaacaacgaactgccttcttcctt 4328
| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 415 tgatggtgaaaaggttgatccaggactgacatgtacaaacaaggaactgccttcttcctt 474
Query: 4329 ggtgacgg 4336
||| ||||
Sbjct: 475 ggtcacgg 482
Score = 145 bits (73), Expect = 3e-33
Identities = 112/125 (89%)
Strand = Plus / Plus
Query: 4529 atccattaccagatccgaaatcagaatgttctgaagctgatatggttgatcaaatgaaga 4588
||||||||||||| | ||||||||| |||||||||||||| ||||||||||||||||| |
Sbjct: 351 atccattaccagagcggaaatcagattgttctgaagctgagatggttgatcaaatgaaaa 410
Query: 4589 catctaatggtgaaaaggttgattcaggactggcatgtaaaaacgtggaactacctcctt 4648
||||| ||||||||||||||||| |||||||| |||||| |||| |||||| ||| |||
Sbjct: 411 catctgatggtgaaaaggttgatccaggactgacatgtacaaacaaggaactgccttctt 470
Query: 4649 ccttg 4653
|||||
Sbjct: 471 ccttg 475
>gnl|LJGI|BW599658
Length = 477
Score = 702 bits (354), Expect = 0.0
Identities = 411/430 (95%)
Strand = Plus / Plus
Query: 4078 ctgcaggaatcagttaattctgaagctgaaatgagtgatcacaaagaggcggaaaacttc 4137
||||| ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 48 ctgcaagaatccgttaattctgatgctgaaatgagtgatcacaaagaggtggaaaacttg 107
Query: 4138 tctaataatgagggtccacaaaaaatctccaaagcacaggatgaatctgaaattgaggat 4197
||||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||||
Sbjct: 108 tctaataatgacggtccacaaagaatctctaaagcacatgatgaatctgaaattgaggat 167
Query: 4198 cgaacagatctattaccagattggaaatcagaatgttctgaagctgatatggttgatcca 4257
|| ||| ||| ||||||| || |||||||| ||||||||||||||||||||||||||| |
Sbjct: 168 cggacatatccattaccacatcggaaatcataatgttctgaagctgatatggttgatcaa 227
Query: 4258 atgaagacatctaatggtgaaaaggttgatccagggctgacatgtacaaacaacgaactg 4317
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 228 atgaagacatctaatggtgaaaatgttgatccagggctgacatgtacaaacaacgaactg 287
Query: 4318 ccttcttccttggtgacggagcaagaaaaagctgatgtatcaaatccttcggaaactgag 4377
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 288 ccttcttccttggtgacggagcaagaaaaatctgatgtatcaaatccttcggaaactgag 347
Query: 4378 gccccctctgcaaatccagtacttctgcaggaatcagttaattctgatgctgaaatgagt 4437
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gccccctctgctaatccagtacttctgcaggaatcagttaattctgatgctgaaatgagt 407
Query: 4438 gatcacaaagaggcggaaaacttgtctaataatgagggtccacaaaaaatctccaaagca 4497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gatcacaaagaggcggaaaacttgtctaataatgagggtccacaaaaaatctccaaagca 467
Query: 4498 caggatgagt 4507
||||||||||
Sbjct: 468 caggatgagt 477
Score = 543 bits (274), Expect = e-153
Identities = 416/462 (90%), Gaps = 1/462 (0%)
Strand = Plus / Plus
Query: 4369 gaaactgaggccccctc-tgcaaatccagtacttctgcaggaatcagttaattctgatgc 4427
|||||||| |||||||| ||| ||||| | ||||||||| ||||| ||||||||||||||
Sbjct: 14 gaaactgatgccccctcgtgcgaatccgggacttctgcaagaatccgttaattctgatgc 73
Query: 4428 tgaaatgagtgatcacaaagaggcggaaaacttgtctaataatgagggtccacaaaaaat 4487
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||
Sbjct: 74 tgaaatgagtgatcacaaagaggtggaaaacttgtctaataatgacggtccacaaagaat 133
Query: 4488 ctccaaagcacaggatgagtctgaaattgaggatcggacagatccattaccagatccgaa 4547
||| |||||||| ||||| ||||||||||||||||||||| ||||||||||| ||| |||
Sbjct: 134 ctctaaagcacatgatgaatctgaaattgaggatcggacatatccattaccacatcggaa 193
Query: 4548 atcagaatgttctgaagctgatatggttgatcaaatgaagacatctaatggtgaaaaggt 4607
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 194 atcataatgttctgaagctgatatggttgatcaaatgaagacatctaatggtgaaaatgt 253
Query: 4608 tgattcaggactggcatgtaaaaacgtggaactacctccttccttgatgacggagcaagt 4667
|||| |||| ||| |||||| |||| ||||| ||| |||||||| ||||||||||||
Sbjct: 254 tgatccagggctgacatgtacaaacaacgaactgccttcttccttggtgacggagcaaga 313
Query: 4668 taaagctgatgtatcaaatccattggaaactgagggtccctctgcaaatccagtactgct 4727
||| |||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||
Sbjct: 314 aaaatctgatgtatcaaatccttcggaaactgaggccccctctgctaatccagtacttct 373
Query: 4728 gcaggaatcagttgattctgaagctgaaatgagtgatcacaaaaaggtggataacttgtc 4787
||||||||||||| ||||||| ||||||||||||||||||||| ||| ||| ||||||||
Sbjct: 374 gcaggaatcagttaattctgatgctgaaatgagtgatcacaaagaggcggaaaacttgtc 433
Query: 4788 taatattgatggtccacaaagaatctctaaagcacaggatga 4829
||||| ||| |||||||||| |||||| ||||||||||||||
Sbjct: 434 taataatgagggtccacaaaaaatctccaaagcacaggatga 475
Score = 438 bits (221), Expect = e-121
Identities = 281/301 (93%)
Strand = Plus / Plus
Query: 3881 atccattaccagagcggaaatcagattgttctgaagctgagatggttgatcaaatgaaaa 3940
||||||||||| | ||||||||| | |||||||||||||| ||||||||||||||||| |
Sbjct: 175 atccattaccacatcggaaatcataatgttctgaagctgatatggttgatcaaatgaaga 234
Query: 3941 catctgatggtgaaaaggttgatccaggactgacatgtacaaacaacgaactgccttctt 4000
||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 235 catctaatggtgaaaatgttgatccagggctgacatgtacaaacaacgaactgccttctt 294
Query: 4001 ccttggtcacggagcaagaaaaagctgaagtatcaaatccttcagaaactgagggtccct 4060
||||||| ||||||||||||||| |||| |||||||||||||| |||||||||| ||||
Sbjct: 295 ccttggtgacggagcaagaaaaatctgatgtatcaaatccttcggaaactgaggccccct 354
Query: 4061 ctgcaaatccattactgctgcaggaatcagttaattctgaagctgaaatgagtgatcaca 4120
|||| |||||| |||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 355 ctgctaatccagtacttctgcaggaatcagttaattctgatgctgaaatgagtgatcaca 414
Query: 4121 aagaggcggaaaacttctctaataatgagggtccacaaaaaatctccaaagcacaggatg 4180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aagaggcggaaaacttgtctaataatgagggtccacaaaaaatctccaaagcacaggatg 474
Query: 4181 a 4181
|
Sbjct: 475 a 475
Score = 143 bits (72), Expect = 1e-32
Identities = 99/108 (91%)
Strand = Plus / Plus
Query: 4726 ctgcaggaatcagttgattctgaagctgaaatgagtgatcacaaaaaggtggataacttg 4785
||||| ||||| ||| ||||||| ||||||||||||||||||||| ||||||| ||||||
Sbjct: 48 ctgcaagaatccgttaattctgatgctgaaatgagtgatcacaaagaggtggaaaacttg 107
Query: 4786 tctaatattgatggtccacaaagaatctctaaagcacaggatgaatct 4833
||||||| ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 108 tctaataatgacggtccacaaagaatctctaaagcacatgatgaatct 155
>gnl|LJGI|BW598317
Length = 387
Score = 260 bits (131), Expect = 7e-68
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 4757 tgagtgatcacaaaaaggtggataacttgtctaatattgatggtccacaaagaatctcta 4816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagtgatcacaaaaaggtggataacttgtctaatattgatggtccacaaagaatctcta 60
Query: 4817 aagcacaggatgaatctagagacattgaggatcatctgagaaagagtcgggtgagggttc 4876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcacaggatgaatctagagacattgaggatcatctgagaaagagtcgggtgagggttc 120
Query: 4877 agtggtaggag 4887
|||||||||||
Sbjct: 121 agtggtaggag 131
Score = 89.7 bits (45), Expect = 2e-16
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 4109 tgagtgatcacaaagaggcggaaaacttctctaataatgagggtccacaaaaaatctcca 4168
|||||||||||||| ||| ||| ||||| ||||||| ||| |||||||||| |||||| |
Sbjct: 1 tgagtgatcacaaaaaggtggataacttgtctaatattgatggtccacaaagaatctcta 60
Query: 4169 aagcacaggatgaatct 4185
|||||||||||||||||
Sbjct: 61 aagcacaggatgaatct 77
Score = 89.7 bits (45), Expect = 2e-16
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 4433 tgagtgatcacaaagaggcggaaaacttgtctaataatgagggtccacaaaaaatctcca 4492
|||||||||||||| ||| ||| ||||||||||||| ||| |||||||||| |||||| |
Sbjct: 1 tgagtgatcacaaaaaggtggataacttgtctaatattgatggtccacaaagaatctcta 60
Query: 4493 aagcacaggatga 4505
|||||||||||||
Sbjct: 61 aagcacaggatga 73
>gnl|LJGI|TC72097
Length = 574
Score = 198 bits (100), Expect = 2e-49
Identities = 100/100 (100%)
Strand = Plus / Minus
Query: 4404 gcaggaatcagttaattctgatgctgaaatgagtgatcacaaagaggcggaaaacttgtc 4463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gcaggaatcagttaattctgatgctgaaatgagtgatcacaaagaggcggaaaacttgtc 61
Query: 4464 taataatgagggtccacaaaaaatctccaaagcacaggat 4503
||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 taataatgagggtccacaaaaaatctccaaagcacaggat 21
Score = 182 bits (92), Expect = 1e-44
Identities = 98/100 (98%)
Strand = Plus / Minus
Query: 4080 gcaggaatcagttaattctgaagctgaaatgagtgatcacaaagaggcggaaaacttctc 4139
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 120 gcaggaatcagttaattctgatgctgaaatgagtgatcacaaagaggcggaaaacttgtc 61
Query: 4140 taataatgagggtccacaaaaaatctccaaagcacaggat 4179
||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 taataatgagggtccacaaaaaatctccaaagcacaggat 21
Score = 127 bits (64), Expect = 7e-28
Identities = 91/100 (91%)
Strand = Plus / Minus
Query: 4728 gcaggaatcagttgattctgaagctgaaatgagtgatcacaaaaaggtggataacttgtc 4787
||||||||||||| ||||||| ||||||||||||||||||||| ||| ||| ||||||||
Sbjct: 120 gcaggaatcagttaattctgatgctgaaatgagtgatcacaaagaggcggaaaacttgtc 61
Query: 4788 taatattgatggtccacaaagaatctctaaagcacaggat 4827
||||| ||| |||||||||| |||||| ||||||||||||
Sbjct: 60 taataatgagggtccacaaaaaatctccaaagcacaggat 21
>gnl|LJGI|DC599972
Length = 329
Score = 105 bits (53), Expect = 3e-21
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 1743 caaaaggcaaggtcgtaaaactcaaaatagagtggagccaccacggcgtagggggagaaa 1802
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 159 caaaaggcaaggtcgtaaaactcaaaatcgagtggagccaccacggcgtaggggtagaaa 218
Query: 1803 a 1803
|
Sbjct: 219 a 219