Miyakogusa Predicted Gene

Lj4g3v2373760.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2373760.1 tr|G7JJ22|G7JJ22_MEDTR Helicase swr1 OS=Medicago
truncatula GN=MTR_4g118720 PE=4 SV=1,74.5,0,coiled-coil,NULL; no
description,Glutamine-Leucine-Glutamine, QLQ; seg,NULL;
HSA,Helicase/SANT-assoc,CUFF.50853.1
         (2799 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP085060 weakly similar to UniRef100_A7NW95 Cluster: Ch...   543   e-153

>gnl|LJGI|BP085060 weakly similar to UniRef100_A7NW95 Cluster: Chromosome chr5
           scaffold_2, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (4%)
          Length = 376

 Score =  543 bits (274), Expect = e-153
 Identities = 311/318 (97%), Gaps = 4/318 (1%)
 Strand = Plus / Minus

                                                                       
Query: 180 tgtcatca-gccaacatggtct-tgatattgaagcattgaagccatcgcgtcttcctttg 237
           |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 318 tgtcatcacgccaacatggtctntgatattgaagcattgaagccatcgcgtcttcctttg 259

                                                                       
Query: 238 ac-tggtggtcctctaatcggatcttcttcgtcacaaacagttggtaggacaaaggactc 296
           || |||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||
Sbjct: 258 acntggtggtcctctaatcggatcttcttcgtcacaagcagttggtagtgcaaaggactc 199

                                                                       
Query: 297 tagagttggcttggctgaaaatgaagcatccaaaatggatccctttacttctggccgtcc 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tagagttggcttggctgaaaatgaagcatccaaaatggatccctttacttctggccgtcc 139

                                                                       
Query: 357 accaattgccccaactggtggagctcctgattattatcaaggatctgtggctcagaagag 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 accaattgccccaactggtggagctcctgattattatcaaggatctgtggctcagaagag 79

                                                                       
Query: 417 tagtcaatcttttgatcaagaaagtccatctagtttggattctaggtctgctaactcgca 476
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 78  tagtcaatcttttgatcaagaaagtccatctagtttggattctaggtctgct-actcgca 20

                             
Query: 477 gtcacaggacagacgtga 494
           ||||||||||||||||||
Sbjct: 19  gtcacaggacagacgtga 2