Miyakogusa Predicted Gene

Lj4g3v2373740.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2373740.1 Non Chatacterized Hit- tr|I1KLI1|I1KLI1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,73.01,0,TPR-like,NULL; PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide,CUFF.50866.1
         (3100 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV779633 weakly similar to UniRef100_A7PBM0 Cluster: Ch...   835   0.0  

>gnl|LJGI|AV779633 weakly similar to UniRef100_A7PBM0 Cluster: Chromosome chr16
            scaffold_10, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr16 scaffold_10, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 440

 Score =  835 bits (421), Expect = 0.0
 Identities = 431/433 (99%), Gaps = 1/433 (0%)
 Strand = Plus / Minus

                                                                        
Query: 675  gtttgatgggggcattgcacgagatgttataggtctgaacaccttgattgatgggtattg 734
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440  gtttgatgggggcattgcacgagatgttataggtctgaacaccttgattgatgggtattg 381

                                                                        
Query: 735  tgaagcggggttgatgagtcaagcactagctttgatggagaacagttggaagactggtgt 794
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380  tgaagcggggttgatgagtcaagcactagctttgatggagaacagttggaagactggtgt 321

                                                                        
Query: 795  caagccagatattgttagttataattctttgctcaaaggtttttgtaaagcgggtgatct 854
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320  caagccagatattgttagttataattctttgctcaaaggtttttgtaaagcgggtgatct 261

                                                                        
Query: 855  tgtaagggcagagtctcttttcgatgagattttgggctttcagagggacggagaatctgg 914
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260  tgtaagggcagagtctcttttcgatgagattttgggctttcagagggacggagaatctgg 201

                                                                        
Query: 915  tcagttaaaaaacaatgctgttgatacccgggatgaattaagaaatatacggccaacact 974
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 200  tcagttaaaaaacaatgctgttgatacccgggatgaattaagaaatatacggccgacact 141

                                                                        
Query: 975  tgctacgtacacaacattgatttctgcgtacggtaagcattgtggtattgaagaatcccg 1034
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140  tgctacgtacacaacattgatttctgcgtacggtaagcattgtggtattgaagaatcccg 81

                                                                        
Query: 1035 ttctctgtatgaacaaatggttatgagtggaatcatgccggatgttgttgcttgtaattc 1094
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 80   ttctctgtatgaacaaatggttatgagtggaatcatgccggatg-tgttgcttgtaattc 22

                         
Query: 1095 tattctttatgga 1107
            |||||||||||||
Sbjct: 21   tattctttatgga 9