Miyakogusa Predicted Gene

Lj4g3v2371650.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2371650.1 tr|B9P6U2|B9P6U2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_593580 PE=3
SV=1,56.76,1e-18,INTEGRAL MEMBRANE FAMILY PROTEIN,NULL; NITRATE,
FROMATE, IRON DEHYDROGENASE,NULL; seg,NULL; A_tha_TI,CUFF.50841.1
         (582 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63349 weakly similar to UniRef100_A7NW78 Cluster: Chr...  1154   0.0  
gnl|LJGI|AV779361 weakly similar to UniRef100_A7PTY8 Cluster: Ch...   264   6e-70

>gnl|LJGI|TC63349 weakly similar to UniRef100_A7NW78 Cluster: Chromosome chr5
           scaffold_2, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (66%)
          Length = 717

 Score = 1154 bits (582), Expect = 0.0
 Identities = 582/582 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagggtcagggtaaggccatgatgatggaaggggtggaaaacagcaaaggaagagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34  atggagggtcagggtaaggccatgatgatggaaggggtggaaaacagcaaaggaagagaa 93

                                                                       
Query: 61  aaagctgctgttgggggtgcttgtgatttggtcttgaggcttttggccttggctctgact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  aaagctgctgttgggggtgcttgtgatttggtcttgaggcttttggccttggctctgact 153

                                                                       
Query: 121 cttgctgctgctattgttgttggggtggataatcataccaaggttgttccaattaagatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 cttgctgctgctattgttgttggggtggataatcataccaaggttgttccaattaagatt 213

                                                                       
Query: 181 ctggatggtttaccccctgtgaatgttcctgttcctgctaagtggcattacctctctgcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ctggatggtttaccccctgtgaatgttcctgttcctgctaagtggcattacctctctgcc 273

                                                                       
Query: 241 tttgtctactttctagtggcaaatgcaatagcatctacatatggagccttctctctggtc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tttgtctactttctagtggcaaatgcaatagcatctacatatggagccttctctctggtc 333

                                                                       
Query: 301 cttgccataataaataagggtaaaagcagagggttagggtcattgatcactgtccttgac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cttgccataataaataagggtaaaagcagagggttagggtcattgatcactgtccttgac 393

                                                                       
Query: 361 gcattgatggtagctttgctattttccggcaacggagccgccagcgcagtgggtgtgctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gcattgatggtagctttgctattttccggcaacggagccgccagcgcagtgggtgtgctt 453

                                                                       
Query: 421 gggtactatggaaactctcatgtgcaatggaagaaggtctgcaatgtcttcgacaacttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gggtactatggaaactctcatgtgcaatggaagaaggtctgcaatgtcttcgacaacttt 513

                                                                       
Query: 481 tgtcaccaattcgctgcttctgttcttctctccttgctaggatcagcagcattcctcttg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tgtcaccaattcgctgcttctgttcttctctccttgctaggatcagcagcattcctcttg 573

                                                     
Query: 541 ctagtgttgcttcctctgttgaggcttcaacggaggaattag 582
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ctagtgttgcttcctctgttgaggcttcaacggaggaattag 615


>gnl|LJGI|AV779361 weakly similar to UniRef100_A7PTY8 Cluster: Chromosome chr7
           scaffold_31, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr7 scaffold_31, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (21%)
          Length = 330

 Score =  264 bits (133), Expect = 6e-70
 Identities = 149/153 (97%), Gaps = 1/153 (0%)
 Strand = Plus / Minus

                                                                       
Query: 416 tgcttgggtactatggaaactc-tcatgtgcaatggaagaaggtctgcaatgtcttcgac 474
           |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 330 tgcttgggtactatggaaactcgtcatgtgccatggaagaaggtctgcaatgtcttcgac 271

                                                                       
Query: 475 aacttttgtcaccaattcgctgcttctgttcttctctccttgctaggatcagcagcattc 534
           ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aacttttgtcacccattccctgcttctgttcttctctccttgctaggatcagcagcattc 211

                                            
Query: 535 ctcttgctagtgttgcttcctctgttgaggctt 567
           |||||||||||||||||||||||||||||||||
Sbjct: 210 ctcttgctagtgttgcttcctctgttgaggctt 178