Miyakogusa Predicted Gene
- Lj4g3v2370480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2370480.1 tr|G7JJ54|G7JJ54_MEDTR Acyl-CoA-binding
domain-containing protein OS=Medicago truncatula
GN=MTR_4g11,81.94,0,Kelch_4,NULL; RANGAP1-INTERACTING
PROTEIN-RELATED,NULL; KELCH REPEAT DOMAIN,NULL; no
description,Kel,CUFF.50850.1
(1551 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74007 similar to UniRef100_A7NW70 Cluster: Chromosome... 569 e-161
gnl|LJGI|BP056370 similar to UniRef100_A7NW70 Cluster: Chromosom... 323 2e-87
gnl|LJGI|TC63231 similar to UniRef100_A7PLS7 Cluster: Chromosome... 244 1e-63
>gnl|LJGI|TC74007 similar to UniRef100_A7NW70 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (14%)
Length = 535
Score = 569 bits (287), Expect = e-161
Identities = 309/315 (98%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 1238 tggctgacacactgaaggaaatggaatcgcttagagagaagcttggaagtctagagtttt 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 tggctgacacactgaaggaaatggaatcgcttagagagaagcttggaagtctagagtttt 73
Query: 1298 cccaagaagaggccaacaacctatcaaacattgtccactctgataacgttcggctcgagc 1357
||| ||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 74 ccctagaagaggccaaccacctatccaaccttgtccactctgataacgttcggctcgagc 133
Query: 1358 atgatgtggccttcctcaaggctgttttagatgatacacagaaggaattgcattctacaa 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atgatgtggccttcctcaaggctgttttagatgatacacagaaggaattgcattctacaa 193
Query: 1418 ggggagttattgcaggagaaagagctcgggcattccaacttcagtatgaagtatttcatc 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ggggagttattgcaggagaaagagctcgggcattccaacttcagtatgaagtatttcatc 253
Query: 1478 tcaaacagagattgcaatctatggaaaatcgagcatctacacccagga-aaccatttcac 1536
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 254 tcaaacagagattgctatctatggaaaatcgagcatctacacccaggacaaccatttcac 313
Query: 1537 catgtgcaatgaagt 1551
|||||||||||||||
Sbjct: 314 catgtgcaatgaagt 328
>gnl|LJGI|BP056370 similar to UniRef100_A7NW70 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (12%)
Length = 462
Score = 323 bits (163), Expect = 2e-87
Identities = 239/259 (92%), Gaps = 4/259 (1%)
Strand = Plus / Minus
Query: 1271 gagagaagcttggaagtctagagttttcccaagaagaggccaacaacctatcaaacattg 1330
||||||||||||||| ||||||| |||||| |||||||||| |||||||||| ||| ||
Sbjct: 462 gagagaagcttggaaatctagagatttccccagaagaggcccacaacctatccaaccctg 403
Query: 1331 tccactctgataacgttcggctcgagcatgatgtggccttcctcaaggctgttttagatg 1390
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tcccctctgaaaacgttcggctcgagcatgatgtggccttcctcaaggctgttttagatg 343
Query: 1391 ataca-cagaaggaattgca-ttctacaaggggagttattgca-ggagaaagagctcggg 1447
||||| ||||||| |||||| || || ||||||| |||||||| ||||||||||||||||
Sbjct: 342 atacaccagaagg-attgcacttgtaaaaggggacttattgcacggagaaagagctcggg 284
Query: 1448 cattccaacttcagtatgaagtatttcatctcaaacagagattgcaatctatggaaaatc 1507
|||||| ||||||||||||||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 283 cattcccacttcagtatgaagtatttcatctccaccagagattgccatctatggaaaatc 224
Query: 1508 gagcatctacacccaggaa 1526
|||||||||||||||||||
Sbjct: 223 gagcatctacacccaggaa 205
>gnl|LJGI|TC63231 similar to UniRef100_A7PLS7 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1652
Score = 244 bits (123), Expect = 1e-63
Identities = 218/233 (93%), Gaps = 14/233 (6%)
Strand = Plus / Minus
Query: 1333 cactctgataacgttcggctcgagcatgatgtggccttcctcaaggctgttttagatgat 1392
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1652 cactctgataacgttcggctcgagcatgatgtgnccttcctcaaggctgttttagatgat 1593
Query: 1393 acacagaaggaattgcattctacaaggggagttattg-caggagaaagagctc-gggcat 1450
||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 1592 acacagaaggaattgcattctacaaggggagttattgccaggagaaagagctctgggcat 1533
Query: 1451 -tccaa-cttcagta-tgaagtat-ttca-tctcaaa-cagagat-tgcaatcta-tgga 1502
||||| |||||||| |||||||| |||| ||||||| ||||||| ||||||||| ||||
Sbjct: 1532 ntccaagcttcagtactgaagtatcttcattctcaaancagagatntgcaatctactgga 1473
Query: 1503 aaa-tcgagcatctacaccca-ggaaaccatttcaccatg--tgcaatgaagt 1551
||| ||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 1472 aaactcgagcatctacacccacggaaaccatttcaccatgnntgcaatgaagt 1420