Miyakogusa Predicted Gene
- Lj4g3v2369420.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2369420.1 Non Chatacterized Hit- tr|I1HE35|I1HE35_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,44.53,4e-16,zf-CCCH,Zinc finger, CCCH-type; CCCH zinc finger,NULL;
zinc finger,Zinc finger, CCCH-type; seg,NULL;,CUFF.50833.1
(1473 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76104 similar to UniRef100_A7NW62 Cluster: Chromosome... 2870 0.0
gnl|LJGI|AV781302 similar to UniRef100_A7NW62 Cluster: Chromosom... 630 e-180
gnl|LJGI|TC68766 similar to UniRef100_A7NW62 Cluster: Chromosome... 339 3e-92
gnl|LJGI|TC73416 similar to UniRef100_A7PTX9 Cluster: Chromosome... 86 7e-16
>gnl|LJGI|TC76104 similar to UniRef100_A7NW62 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (74%)
Length = 2368
Score = 2870 bits (1448), Expect = 0.0
Identities = 1465/1473 (99%)
Strand = Plus / Plus
Query: 1 atggaccggtacggcgggtcgcagtcgcagtctgatccgtcgccggaatggcccctcgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atggaccggtacggcgggtcgcagtcgcagtctgatccgtcgccggaatggcccctcgcc 192
Query: 61 gccggagaaaccgccctcgaagagccggtgtggcaactgggattgagtggtggtggtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gccggagaaaccgccctcgaagagccggtgtggcaactgggattgagtggtggtggtgaa 252
Query: 121 tcgtaccctctccgtcccgatgaggctgattgtatctactatctgagaactggttattgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tcgtaccctctccgtcccgatgaggctgattgtatctactatctgagaactggttattgt 312
Query: 181 ggttacggctcgcggtgtcggttcaatcatccccgtgaccgtggcgcggttattggagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggttacggctcgcggtgtcggttcaatcatccccgtgaccgtggcgcggttattggagct 372
Query: 241 gcgaggactnnnnnnnagtatccggaaagagcaggacagcctgtgtgtcagtactatatg 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gcgaggactgggggggagtatccggaaagagcaggacagcctgtgtgtcagtactatatg 432
Query: 301 aggacgggatcatgcaaatttggttcatcttgcaagtaccaccatcctaggcagccatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aggacgggatcatgcaaatttggttcatcttgcaagtaccaccatcctaggcagccatca 492
Query: 361 ggcactactactcctgtgtcactaaattatcatggatatccattgcgaatgggtcagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ggcactactactcctgtgtcactaaattatcatggatatccattgcgaatgggtcagaaa 552
Query: 421 gagtgttcctattatgtgaaaactggacaatgcaagtttggtgcaacttgtaaattccat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gagtgttcctattatgtgaaaactggacaatgcaagtttggtgcaacttgtaaattccat 612
Query: 481 catccacagcctgccggtggccaaatgctagcaccatcgccagttccctctgtttcaccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 catccacagcctgccggtggccaaatgctagcaccatcgccagttccctctgtttcaccg 672
Query: 541 ctgcctgtaccggtgccttcaccagtttatcaaactggacagcctccatctggtccttca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ctgcctgtaccggtgccttcaccagtttatcaaactggacagcctccatctggtccttca 732
Query: 601 tcacaacaatatggcgtactggtcgcaaggccacctctgctccctggctcatttgtccag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tcacaacaatatggcgtactggtcgcaaggccacctctgctccctggctcatttgtccag 792
Query: 661 ggcccctatgggccaatggtattgtcccctgccatgtaccctctctccagctggggtccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 ggcccctatgggccaatggtattgtcccctgccatgtaccctctctccagctggggtccg 852
Query: 721 tatcaggctcctgcaagtcctgtagttccttccagtagtccgtctaatgttggttcaaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 tatcaggctcctgcaagtcctgtagttccttccagtagtccgtctaatgttggttcaaca 912
Query: 781 cagtttaatgttggttcaacacagttttatgggattacccatttaccttcaccaacaagt 840
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 913 cagtttaatgttggttcaacacagttttatgggattacccatttaccttcactaacaagt 972
Query: 841 gcctatggtggaccatatcaaactacggtttcatcaatcggtccttcaggcagtagccag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 gcctatggtggaccatatcaaactacggtttcatcaatcggtccttcaggcagtagccag 1032
Query: 901 aaggagcacacattaccagaaaggcctgaccaaccagaatgccattattacatgaaaaca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 aaggagcacacattaccagaaaggcctgaccaaccagaatgccattattacatgaaaaca 1092
Query: 961 ggggagtgtaaatttggtcaatcatgtagatatcatcatccaccagatatgggtgcgtca 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 ggggagtgtaaatttggtcaatcatgtagatatcatcatccaccagatatgggtgcgtca 1152
Query: 1021 aaggcaaatgttaaccttagtcctgtgggtcttcctttgcgcccgggggcaccaccttgc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 aaggcaaatgttaaccttagtcctgtgggtcttcctttgcgcccgggggcaccaccttgc 1212
Query: 1081 actcattatacacagcgtggaatttgtaagtttggttctgcgtgcaaatttgatcatccg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1213 actcattatacacagcgtggaatttgtaagtttggttctgcgtgcaaatttgatcatccg 1272
Query: 1141 attggatcgctgagttacagcccatctgcttcttccctggctgatatgccggttgcaccc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1273 attggatcgctgagttacagcccatctgcttcttccctggctgatatgccggttgcaccc 1332
Query: 1201 tatcctgtgggttcctcaattggtactcttgccccatcatcttcttcatcagagttgcgg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1333 tatcctgtgggttcctcaattggtactcttgccccatcatcttcttcatcagagttgcgg 1392
Query: 1261 cctgaacttgcccctggatccagcaaggagccagtttcgtccagaatgtcttcatcaatg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1393 cctgaacttgcccctggatccagcaaggagccagtttcgtccagaatgtcttcatcaatg 1452
Query: 1321 agcacatctactggatcagttggcttgaccttgtcaactgctggacccatttctcaatca 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1453 agcacatctactggatcagttggcttgaccttgtcaactgctggacccatttctcaatca 1512
Query: 1381 agcactctgcaatctgctccgagttccagttctttagcaactacaaccagtgccacatca 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1513 agcactctgcaatctgctccgagttccagttctttagcaactacaaccagtgccacatca 1572
Query: 1441 agtagcactgtctctcaaagttcaagctagcaa 1473
|||||||||||||||||||||||||||||||||
Sbjct: 1573 agtagcactgtctctcaaagttcaagctagcaa 1605
>gnl|LJGI|AV781302 similar to UniRef100_A7NW62 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 533
Score = 630 bits (318), Expect = e-180
Identities = 332/339 (97%)
Strand = Plus / Plus
Query: 1 atggaccggtacggcgggtcgcagtcgcagtctgatccgtcgccggaatggcccctcgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atggaccggtacggcgggtcgcagtcgcagtctgatccgtcgccggaatggcccctcgcc 254
Query: 61 gccggagaaaccgccctcgaagagccggtgtggcaactgggattgagtggtggtggtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gccggagaaaccgccctcgaagagccggtgtggcaactgggattgagtggtggtggtgaa 314
Query: 121 tcgtaccctctccgtcccgatgaggctgattgtatctactatctgagaactggttattgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tcgtaccctctccgtcccgatgaggctgattgtatctactatctgagaactggttattgt 374
Query: 181 ggttacggctcgcggtgtcggttcaatcatccccgtgaccgtggcgcggttattggagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggttacggctcgcggtgtcggttcaatcatccccgtgaccgtggcgcggttattggagct 434
Query: 241 gcgaggactnnnnnnnagtatccggaaagagcaggacagcctgtgtgtcagtactatatg 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gcgaggactgggggggagtatccggaaagagcaggacagcctgtgtgtcagtactatatg 494
Query: 301 aggacgggatcatgcaaatttggttcatcttgcaagtac 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aggacgggatcatgcaaatttggttcatcttgcaagtac 533
>gnl|LJGI|TC68766 similar to UniRef100_A7NW62 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 2580
Score = 339 bits (171), Expect = 3e-92
Identities = 419/504 (83%)
Strand = Plus / Plus
Query: 133 cgtcccgatgaggctgattgtatctactatctgagaactggttattgtggttacggctcg 192
|||||||||||||||||||| ||||||| ||||||| |||| || || | || ||
Sbjct: 426 cgtcccgatgaggctgattgctcctactatttgagaaccggtttctgcggctttggttcc 485
Query: 193 cggtgtcggttcaatcatccccgtgaccgtggcgcggttattggagctgcgaggactnnn 252
|||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 486 cggtgtcggttcaatcatccccgtgaccgtggcgcggttattggagctgccagaactgcc 545
Query: 253 nnnnagtatccggaaagagcaggacagcctgtgtgtcagtactatatgaggacgggatca 312
| ||||| ||| ||||||| ||||||||||| ||||| ||||||||||| |||||
Sbjct: 546 ggggactatccagaacgagcaggccagcctgtgtgccagtattatatgaggacaggatcg 605
Query: 313 tgcaaatttggttcatcttgcaagtaccaccatcctaggcagccatcaggcactactact 372
|||||||| ||| | ||||||||||| || || ||||||||| || ||||| ||| |
Sbjct: 606 tgcaaattcggtgcgtcttgcaagtatcatcaccctaggcaggcaggaggcatggctagt 665
Query: 373 cctgtgtcactaaattatcatggatatccattgcgaatgggtcagaaagagtgttcctat 432
|| ||||||||||||||| ||||||||||| | ||| |||| |||||||||| ||||||
Sbjct: 666 ccggtgtcactaaattattatggatatccaatacgaccgggtgagaaagagtgctcctat 725
Query: 433 tatgtgaaaactggacaatgcaagtttggtgcaacttgtaaattccatcatccacagcct 492
||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| ||
Sbjct: 726 tatgtgaaaacgggacaatgtaagttcagtgcaacttgtaaattccatcatccacttccc 785
Query: 493 gccggtggccaaatgctagcaccatcgccagttccctctgtttcaccgctgcctgtaccg 552
| |||| ||||| | ||||||| ||||||||||| | |||||||| | ||||||||
Sbjct: 786 actggtgttcaaattcaagcaccaccgccagttcccccggtttcacctttacctgtacca 845
Query: 553 gtgccttcaccagtttatcaaactggacagcctccatctggtccttcatcacaacaatat 612
|| |||||||| | ||||||| | |||| ||||||||||||||||||| ||||||
Sbjct: 846 gtaccttcacccttgtatcaaaacgtacagtctccatctggtccttcatctcaacaaatc 905
Query: 613 ggcgtactggtcgcaaggccacct 636
|| |||||||| ||||||||||||
Sbjct: 906 ggtgtactggttgcaaggccacct 929
Score = 317 bits (160), Expect = 1e-85
Identities = 328/384 (85%)
Strand = Plus / Plus
Query: 1036 cttagtcctgtgggtcttcctttgcgcccgggggcaccaccttgcactcattatacacag 1095
|||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1311 cttagtcctgcaggccttcctttgcgcccgggggcaccaccttgcactcattatgcacag 1370
Query: 1096 cgtggaatttgtaagtttggttctgcgtgcaaatttgatcatccgattggatcgctgagt 1155
|| ||| | |||||||||||| |||| ||||| ||||||||||| || || |||||
Sbjct: 1371 cggggagtatgtaagtttggtcctgcatgcaagtttgatcatcctatgtcttcaatgagt 1430
Query: 1156 tacagcccatctgcttcttccctggctgatatgccggttgcaccctatcctgtgggttcc 1215
||||| |||||||||||||||||| |||| ||||| ||||| |||||||||||||||||
Sbjct: 1431 tacagtccatctgcttcttccctgactgacatgccagttgcgccctatcctgtgggttca 1490
Query: 1216 tcaattggtactcttgccccatcatcttcttcatcagagttgcggcctgaacttgcccct 1275
||||||||||||||||| ||| ||||||| |||||||| |||| ||| | |||| || |
Sbjct: 1491 tcaattggtactcttgctccaccatcttcatcatcagaattgcagcccggacttaccaca 1550
Query: 1276 ggatccagcaaggagccagtttcgtccagaatgtcttcatcaatgagcacatctactgga 1335
||||||| ||||||| | ||| | |||||||| ||||||||||||| |||||| || |||
Sbjct: 1551 ggatccaacaaggagtctgttccatccagaatatcttcatcaatgaacacatcgaccgga 1610
Query: 1336 tcagttggcttgaccttgtcaactgctggacccatttctcaatcaagcactctgcaatct 1395
|| ||||||||||| ||||| || | || ||| |||||||||||||||||| | ||||
Sbjct: 1611 tctgttggcttgactttgtctaccggtgaacctgtttctcaatcaagcactcaaccatct 1670
Query: 1396 gctccgagttccagttctttagca 1419
|||| |||||||| | ||||||||
Sbjct: 1671 gctcagagttccattcctttagca 1694
>gnl|LJGI|TC73416 similar to UniRef100_A7PTX9 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 820
Score = 85.7 bits (43), Expect = 7e-16
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 392 atggatatccattgcgaatgggtcagaaagagtgttcctattatgtgaaaactggacaat 451
||||||| ||||||||| |||| ||||||| || ||||| ||| ||||||| || ||||
Sbjct: 569 atggatacccattgcgaccgggtgagaaagaatgctcctactatttgaaaacggggcaat 628
Query: 452 gcaagtttggtgcaacttgtaaattccatcatccacagcctgc 494
|||| |||||| ||||||||||||||||||||| || |||||
Sbjct: 629 gcaaatttggtttaacttgtaaattccatcatcctcaacctgc 671