Miyakogusa Predicted Gene
- Lj4g3v2367300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2367300.1 Non Chatacterized Hit- tr|I1MGR4|I1MGR4_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,92.03,0,CULLIN-RELATED,NULL; CULLIN,NULL; Cullin,Cullin homology;
Cullin protein neddylation domain,Cullin p,CUFF.50821.1
(1170 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67360 homologue to UniRef100_A7NW32 Cluster: Chromoso... 1106 0.0
gnl|LJGI|TC63842 homologue to UniRef100_Q8LP18 Cluster: Cullin-l... 753 0.0
gnl|LJGI|AV425591 similar to UniRef100_A9T788 Cluster: Predicted... 484 e-136
gnl|LJGI|TC73278 homologue to UniRef100_Q711G6 Cluster: Cullin 1... 454 e-127
>gnl|LJGI|TC67360 homologue to UniRef100_A7NW32 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 910
Score = 1106 bits (558), Expect = 0.0
Identities = 580/586 (98%), Gaps = 1/586 (0%)
Strand = Plus / Plus
Query: 586 agaaaacttacatggatttactccttgggtacctgtaacgtagttggcaaatttgatccg 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaaaacttacatggatttactccttgggtacctgtaacgtagttggcaaatttgatccg 60
Query: 646 aaaacagtggagctggttgttacaacctatcaggcttcagcgttgctgctttttaattcc 705
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 61 aaaacagtggagctggttgttactacctatcaggcttcagcgttgctgctttgtaattcc 120
Query: 706 tcagataggctgagttattcagagataatgactcagttaaacttgacggatgatgatgtt 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcagataggctgagttattcagagataatgactcagttaaacttgacggatgatgatgtt 180
Query: 766 attagattgctccactccttgtcctgtgccaagtacaagattcttaa-caaggaaccaaa 824
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 181 attagattgctccactccttgtcctgtgccaagtacaagattcttaatcaaggaaccgaa 240
Query: 825 cacaaaaacaatatcaaatacagattattttgaatttaattcaaaatttactgacaaaat 884
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacaaacacaatatcaaatacagattattttgaatttaattcaaaatttactgacaaaat 300
Query: 885 gaggaggatcaagattcctcttcctcctgtggatgaaaagaagaaagtaattgagaatgt 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaggaggatcaagattcctcttcctcctgtggatgaaaagaagaaagtaattgagaatgt 360
Query: 945 tgacaaggacagacgatatgccattgatgcctcacttgtgcgtattatgaagagccgaaa 1004
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgacaagggcagacgatatgccattgatgcctcacttgtgcgtattatgaagagccgaaa 420
Query: 1005 agttttggggtaccaacagttagttatggaatgtgttgagcagttgggtcgcatgtttaa 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agttttggggtaccaacagttagttatggaatgtgttgagcagttgggtcgcatgtttaa 480
Query: 1065 gcctgatgtcaaggcaattaagaagcggattgaagatttgatttctcgagactacctgga 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcctgatgtcaaggcaattaagaagcggattgaagatttgatttctcgagactacctgga 540
Query: 1125 aagagagaaagacaatccaaacatgttcaggtacttggcttgatat 1170
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagagagaaagacaatccaaacatgttcaggtacttggcttgatat 586
>gnl|LJGI|TC63842 homologue to UniRef100_Q8LP18 Cluster: Cullin-like protein1; n=1;
Pisum sativum|Rep: Cullin-like protein1 - Pisum sativum
(Garden pea), partial (34%)
Length = 1296
Score = 753 bits (380), Expect = 0.0
Identities = 623/704 (88%)
Strand = Plus / Plus
Query: 457 gacttgacagtcacagttctgactactggcttctggcctagttacaaatcttttgatctc 516
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 49 gacttgacagttacagttctgactactggtttctggcctagttacaaatcttttgacctt 108
Query: 517 aatcttccagcagaaatggttaagtgtgttgaaatttttaaagaattttatcagactaaa 576
|||||||| ||||||||||||| ||||||||| |||| || || |||||||| || |||
Sbjct: 109 aatcttcctgcagaaatggttagatgtgttgaagttttcaaggagttttatcaaacaaaa 168
Query: 577 acaaagcagagaaaacttacatggatttactccttgggtacctgtaacgtagttggcaaa 636
|| ||||| ||||| ||||| ||||| || |||||||||||||| || || || |||
Sbjct: 169 actaagcacagaaagcttacttggatctattccttgggtacctgcaatataagcggaaaa 228
Query: 637 tttgatccgaaaacagtggagctggttgttacaacctatcaggcttcagcgttgctgctt 696
||||| || ||||| |||||||| |||| || || || ||||||||||| ||||| |||
Sbjct: 229 tttgaaccaaaaactatggagctgattgtgacgacttaccaggcttcagcattgcttctt 288
Query: 697 tttaattcctcagataggctgagttattcagagataatgactcagttaaacttgacggat 756
||||||||||||||||| ||||||||||| || |||||||||||||||||||| | |||
Sbjct: 289 tttaattcctcagatagactgagttattcggacataatgactcagttaaacttatctgat 348
Query: 757 gatgatgttattagattgctccactccttgtcctgtgccaagtacaagattcttaacaag 816
|| |||||||||||| | ||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 349 gaggatgttattagacttctccattccttgtcatgtgccaagtacaagatccttaacaag 408
Query: 817 gaaccaaacacaaaaacaatatcaaatacagattattttgaatttaattcaaaatttact 876
||||||| ||||||||||||||| ||| |||||||||||||||||||||||||| ||
Sbjct: 409 gaaccaagcacaaaaacaatatctcctactgattattttgaatttaattcaaaattcaca 468
Query: 877 gacaaaatgaggaggatcaagattcctcttcctcctgtggatgaaaagaagaaagtaatt 936
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 469 gacaaaatgaggaggatcaagattcctcttcctcctgtggatgagaagaaaaaagtaatt 528
Query: 937 gagaatgttgacaaggacagacgatatgccattgatgcctcacttgtgcgtattatgaag 996
||| |||||||||| |||||| ||||||| |||||||||||| |||||||||| ||||||
Sbjct: 529 gaggatgttgacaaagacagaagatatgctattgatgcctcaattgtgcgtataatgaag 588
Query: 997 agccgaaaagttttggggtaccaacagttagttatggaatgtgttgagcagttgggtcgc 1056
|| || |||||||| | |||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 589 agtcggaaagttttaagttaccaacagttagttatggagtgtgttgaacagttaggtcgc 648
Query: 1057 atgtttaagcctgatgtcaaggcaattaagaagcggattgaagatttgatttctcgagac 1116
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 649 atgtttaagcctgatgtcaaggcaattaagaagcgtattgaagatttgatctctcgagac 708
Query: 1117 tacctggaaagagagaaagacaatccaaacatgttcaggtactt 1160
||| |||||||||| ||||| ||| |||| |||||| ||||||
Sbjct: 709 tacttggaaagagacaaagataatgcaaatttgttcaagtactt 752
>gnl|LJGI|AV425591 similar to UniRef100_A9T788 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(11%)
Length = 247
Score = 484 bits (244), Expect = e-136
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 197 aggtggtcaagctgctcgcctatatcggtgacaaagacttgtttgctgagttctatagga 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 aggtggtcaagctgctcgcctatatcggtgacaaagacttgtttgctgagttctatagga 63
Query: 257 agaagcttgctcggagacttctttttgataagagtgccaatgatgaccatgagaggagta 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 agaagcttgctcggagacttctttttgataagagtgccaatgatgaccatgagaggagta 123
Query: 317 ttttgtcaaaattgaagcaacaatgtggtcaacagtttactgtaaagatggaaggaatgg 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ttttgtcaaaattgaagcaacaatgtggtcaacagtttactgtaaagatggaaggaatgg 183
Query: 377 ttaatgatttgacaatggcaaaggagaatcaaacaaactttgatgagtatttaagcgata 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ttaatgatttgacaatggcaaaggagaatcaaacaaactttgatgagtatttaagcgata 243
Query: 437 atcc 440
||||
Sbjct: 244 atcc 247
>gnl|LJGI|TC73278 homologue to UniRef100_Q711G6 Cluster: Cullin 1C; n=1; Nicotiana
tabacum|Rep: Cullin 1C - Nicotiana tabacum (Common
tobacco), partial (17%)
Length = 684
Score = 454 bits (229), Expect = e-127
Identities = 235/237 (99%)
Strand = Plus / Plus
Query: 934 attgagaatgttgacaaggacagacgatatgccattgatgcctcacttgtgcgtattatg 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attgagaatgttgacaaggacagacgatatgccattgatgcctcacttgtgcgtattatg 60
Query: 994 aagagccgaaaagttttggggtaccaacagttagttatggaatgtgttgagcagttgggt 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagagccgaaaagttttggggtaccaacagttagttatggaatgtgttgagcagttgggt 120
Query: 1054 cgcatgtttaagcctgatgtcaaggcaattaagaagcggattgaagatttgatttctcga 1113
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 121 cgcatgtttaagcctgatgtcaaggccattaagaagcggattgaagatttgatttctcga 180
Query: 1114 gactacctggaaagagagaaagacaatccaaacatgttcaggtacttggcttgatat 1170
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 181 gactacctggaaagagagaaagacaatcccaacatgttcaggtacttggcttgatat 237