Miyakogusa Predicted Gene
- Lj4g3v2364180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2364180.1 Non Chatacterized Hit- tr|I1N111|I1N111_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40133
PE,30.17,3e-19,Mitochondrial termination factor repeats,Mitochodrial
transcription termination factor-related; mTER,CUFF.50808.1
(583 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chr... 1124 0.0
gnl|LJGI|GO024260 weakly similar to UniRef100_A7NW61 Cluster: Ch... 755 0.0
gnl|LJGI|AV765169 weakly similar to UniRef100_A7NW61 Cluster: Ch... 145 4e-34
gnl|LJGI|TC77615 weakly similar to UniRef100_A7NW61 Cluster: Chr... 82 4e-15
>gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chromosome chr7
scaffold_31, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr7 scaffold_31, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 1406
Score = 1124 bits (567), Expect = 0.0
Identities = 579/583 (99%)
Strand = Plus / Plus
Query: 1 atgaaatcaaaagtaaaattgttgcttaatatgggagtgactccctcaaacatccaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 atgaaatcaaaagtaaaattgttgcttaatatgggagtgactccctcaaacatccaccag 674
Query: 61 ttgcttactacttggccctctgtgctcaaatgtgctgacttgaaggaggctgtggtggaa 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 675 ttgcttactacttggccctctgtgctcaaatgtgctgacttgacggaggctgtggtggaa 734
Query: 121 gtcaagggattgggatttcatccctccaaatcgcattttgtttcagcattacgggtcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gtcaagggattgggatttcatccctccaaatcgcattttgtttcagcattacgggtcaaa 794
Query: 181 aggggtatatccaaatcactttgggatgccaaactcgatgcctttaagacatggggctgc 240
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 aggggtatatccaaatcgccttgggatgccaaactcgatgcctttaagacatggggctgc 854
Query: 241 cctgaagatgctattctggatgcatttaggaggtatccccacatgatgctatactcaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 cctgaagatgctattctggatgcatttaggaggtatccccacatgatgctatactcaatc 914
Query: 301 aaaaaagttaatgcagtgatgagtttttgggtcggccatcttggttgggacccttcagtg 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 915 aaaaaagttaatgcagtgatgagtttttgggtcgtccatcttggttgggacccttcagtg 974
Query: 361 cttctagccgtgccaacacttttttcattaagtttggagaaaaggcttatcccaagggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 cttctagccgtgccaacacttttttcattaagtttggagaaaaggcttatcccaagggct 1034
Query: 421 tcagttgtccagtatcttctctccagaggattgatgaagaaggatgctagcttaagtaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 tcagttgtccagtatcttctctccagaggattgatgaagaaggatgctagcttaagtaca 1094
Query: 481 ccatttatatgtactgacaagctgttccagcaaaaatttgtgaattgttttgaggaggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 ccatttatatgtactgacaagctgttccagcaaaaatttgtgaattgttttgaggaggag 1154
Query: 541 gaagcatctaagctactaagtctatatcggggaggaagctagc 583
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 gaagcatctaagctactaagtctatatcggggaggaagctagc 1197
>gnl|LJGI|GO024260 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 544
Score = 755 bits (381), Expect = 0.0
Identities = 489/525 (93%)
Strand = Plus / Plus
Query: 1 atgaaatcaaaagtaaaattgttgcttaatatgggagtgactccctcaaacatccaccag 60
||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||
Sbjct: 16 atgaaatcaaaagtaaaattgttgcttcatatgggagtgcctccctcaaacatatacctt 75
Query: 61 ttgcttactacttggccctctgtgctcaaatgtgctgacttgaaggaggctgtggtggaa 120
||||||| ||| ||||| || | |||| ||||||||||||||| |||||||||| ||||
Sbjct: 76 ttgcttagaactaggcccactatactcagatgtgctgacttgaacgaggctgtggaggaa 135
Query: 121 gtcaagggattgggatttcatccctccaaatcgcattttgtttcagcattacgggtcaaa 180
|||||||||||||||||||||||||||||||||||||||||| ||| |||| || ||||
Sbjct: 136 gtcaagggattgggatttcatccctccaaatcgcattttgttgtagcgttacaggccaaa 195
Query: 181 aggggtatatccaaatcactttgggatgccaaactcgatgcctttaagacatggggctgc 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 196 aggggtatatccaaatcactttgggatgccaaagtcgatgcctttaagacatgtggctgg 255
Query: 241 cctgaagatgctattctggatgcatttaggaggtatccccacatgatgctatactcaatc 300
|||||||||||||| ||||||||||||||||| |||||||||| ||||||| |||||||
Sbjct: 256 tctgaagatgctattttggatgcatttaggaggaatccccacattatgctatgctcaatc 315
Query: 301 aaaaaagttaatgcagtgatgagtttttgggtcggccatcttggttgggacccttcagtg 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 316 aaaaaagttaatgcagtgatgagtttttgggtcggccgtcttggttgggacccttcagtg 375
Query: 361 cttctagccgtgccaacacttttttcattaagtttggagaaaaggcttatcccaagggct 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cttctagccgtgccatcacttttttcattaagtttggagaaaaggcttatcccaagggct 435
Query: 421 tcagttgtccagtatcttctctccagaggattgatgaagaaggatgctagcttaagtaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tcagttgtccagtatcttctctccagaggattgatgaagaaggatgctagcttaagtaca 495
Query: 481 ccatttatatgtactgacaagctgttccagcaaaaatttgtgaat 525
||||||||||||||||| ||| |||| |||||| |||||||||
Sbjct: 496 ccatttatatgtactgagaagtatttcctgcaaaagtttgtgaat 540
>gnl|LJGI|AV765169 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 573
Score = 145 bits (73), Expect = 4e-34
Identities = 154/181 (85%)
Strand = Plus / Minus
Query: 394 ttggagaaaaggcttatcccaagggcttcagttgtccagtatcttctctccagaggattg 453
|||||||| ||| |||| |||||||||||||||||| ||||||||||||| | ||| |||
Sbjct: 386 ttggagaagaggattattccaagggcttcagttgtcaagtatcttctctctaaaggtttg 327
Query: 454 atgaagaaggatgctagcttaagtacaccatttatatgtactgacaagctgttccagcaa 513
||||||||||| |||||||||| |||||||||| | ||||| ||||||||| ||||
Sbjct: 326 atgaagaaggaagctagcttaactacaccatttggtttgactgatgagctgttcctgcaa 267
Query: 514 aaatttgtgaattgttttgaggaggaggaagcatctaagctactaagtctatatcgggga 573
|| || ||||| ||||||||| |||||||| |||||| ||| ||||| || |||| ||||
Sbjct: 266 aagttcgtgaactgttttgagaaggaggaaacatctaggctgctaaggctgtatcaggga 207
Query: 574 g 574
|
Sbjct: 206 g 206
>gnl|LJGI|TC77615 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 482
Score = 81.8 bits (41), Expect = 4e-15
Identities = 128/157 (81%)
Strand = Plus / Plus
Query: 314 cagtgatgagtttttgggtcggccatcttggttgggacccttcagtgcttctagccgtgc 373
|||||||||||||||||||| |||| ||||| ||||| ||||| |||||||| |
Sbjct: 28 cagtgatgagtttttgggtcagccagcttgggtgggattcttcaacacttctagcatcac 87
Query: 374 caacacttttttcattaagtttggagaaaaggcttatcccaagggcttcagttgtccagt 433
| | ||||| ||| |||||||||| |||| || | ||||||||||||||||| ||||
Sbjct: 88 ccatcatttttggatttagtttggagacaaggattgttccaagggcttcagttgttcagt 147
Query: 434 atcttctctccagaggattgatgaagaaggatgctag 470
|||||||||| | ||| ||||||||||| | ||||||
Sbjct: 148 atcttctctctaaaggtttgatgaagaaaggtgctag 184